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NECEvent2014_7_3_scaffold_4011_1

Organism: NECEvent2014_7_3_Clostridium_perfringens_30_4_v_partial

partial RP 12 / 55 MC: 1 BSCG 9 / 51 MC: 1 ASCG 1 / 38
Location: comp(1..1227)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent transcriptional regulator/sensory box protein n=2 Tax=Clostridium perfringens RepID=B1RPJ7_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 409.0
  • Bit_score: 804
  • Evalue 5.20e-230
  • rbh
sigma-L-dependent transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 409.0
  • Bit_score: 804
  • Evalue 1.50e-230
Probable sigma-L-dependent transcriptional regulator {ECO:0000313|EMBL:BAB82064.1}; TaxID=195102 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 409.0
  • Bit_score: 804
  • Evalue 7.30e-230

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1227
GATGTATCTGATATTATAGGTATGAAAGAAATAAATGAGAAATTTACTAAGATACTTGAAAACTCACAGGATATGATTTGCTTTGTAGATGAAAATGGTATAATAAATTATTTAAATCCTGCATATATTAAAAACTTTTCTAAAGTTAGTTCTGATGTTATAGGAAAAAGTATTTTTGATATTGCTCCTAATGGACTTAGAGCTAAAGTATTTAAAGAAAAAACTTTATTAAAAGATGTAATTCATAAGAAAAACGGTATAAATGTTATAAGTACTATTGATCCTTTATTTATTGATGGACAGTTTAAAGGAGTTATTTCTACTTCTAGACCAGTTAGTTTAATTAAAGAACTTATGTCAAAACTAAATAAATCTGAACAGGAATTAGATTATTATAAAAATGAGTTTTTAAGACAGTTATCTAAAAATTCTTCTTTTAATAATATTATAGGTTCAACTAGAACTCTAAAGGATATAATGTACATGTGTCAAAAGGCTTCAGAAACCACATCAACTGTTCTTATTCGTGGTGAAAGTGGTACAGGTAAGGAACTTATTGCAAAGGCTATACACAATAATAGTAATAGAAAAAATAAGCCTTTTGTAAGGGTTAACTGTGCTTCAATTCCTGAAAATCTCTTAGAAAGTGAATTGTTCGGATATGAAAAGGGAGCTTTTACTGGGGCAGTTCAAAGCAAACCTGGTAAATTTGCTATTGCTGATACAGGTACTATATTCTTAGATGAAATAGGTGATATGCCCTTATCAATGCAAGTTAAACTCCTTAGAGTTTTACAAGAAAGAGAGATTGAAAGCGTAGGAGGAATAACTCCTAAAAACATTGATGTAAGAGTTATTGCTGCAACTAATAGAAATTTAGAAGAAATGATTGAAGAGGGTTCCTTTAGAGAGGATCTTTATTACAGACTTAATGTCTTAGGTATTAATCTTCCTCCACTTAGAGAACGTAAAGAAGATATTCCTGAACTCGCCGAACATTTTATAACTAAGCTAAATAAAAAGTTACATAAAACTATATTAGGAATAAAACAAGATGCCCTTAATCTACTAATTGAGTATTCTTGGCCTGGAAATATACGTGAGCTTGAAAATATAATGGAAAGAGCAATAAATCTTTGTGATGGAGATTATATAGATAGTTCTTATCTGCCTTCATATTTAAAGCCAGTTGAATCAAAGTCTTTTAATTTAAATATTGATATTGAT
PROTEIN sequence
Length: 409
DVSDIIGMKEINEKFTKILENSQDMICFVDENGIINYLNPAYIKNFSKVSSDVIGKSIFDIAPNGLRAKVFKEKTLLKDVIHKKNGINVISTIDPLFIDGQFKGVISTSRPVSLIKELMSKLNKSEQELDYYKNEFLRQLSKNSSFNNIIGSTRTLKDIMYMCQKASETTSTVLIRGESGTGKELIAKAIHNNSNRKNKPFVRVNCASIPENLLESELFGYEKGAFTGAVQSKPGKFAIADTGTIFLDEIGDMPLSMQVKLLRVLQEREIESVGGITPKNIDVRVIAATNRNLEEMIEEGSFREDLYYRLNVLGINLPPLRERKEDIPELAEHFITKLNKKLHKTILGIKQDALNLLIEYSWPGNIRELENIMERAINLCDGDYIDSSYLPSYLKPVESKSFNLNIDID