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NECEvent2014_7_3_scaffold_3214_1

Organism: NECEvent2014_7_3_Enterobacter_cloacae_rel_56_62_partial

partial RP 19 / 55 MC: 2 BSCG 17 / 51 ASCG 10 / 38 MC: 3
Location: comp(3..674)

Top 3 Functional Annotations

Value Algorithm Source
Two-component response regulator OmpR n=3 Tax=Erwinia amylovora RepID=V6CVY4_ERWAM similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 439
  • Evalue 1.80e-120
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 439
  • Evalue 5.20e-121
Transcriptional regulatory protein ompR {ECO:0000313|EMBL:EZJ89977.1}; TaxID=1444134 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 224.0
  • Bit_score: 439
  • Evalue 2.60e-120

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 672
ATGCAAGAAAACTATAAAATTCTGGTCGTGGATGACGACATGCGCCTGCGTGCGCTGCTGGAGCGTTATCTGACCGAGCAGGGCTTCCAGGTTCGCAGCGTCGCGAACGCTGAGCAAATGGATCGTCTGTTGACCCGTGAATCTTTCCATCTGATGGTTCTCGACCTGATGCTGCCAGGCGAAGACGGGCTCTCTATCTGCCGCCGTCTGCGCAGCCAGAGCAACCCGATGCCGATCATTATGGTAACGGCGAAGGGCGAAGAAGTTGACCGTATCGTGGGCCTCGAAATCGGCGCCGACGACTACATTCCAAAACCGTTTAACCCGCGTGAACTGCTGGCGCGCATTCGCGCCGTGCTGCGCCGTCAGGCGAACGAGCTGCCGGGCGCACCGTCGCAGGAAGAAGCCGTTATTGCCTTCGGCAAGTTCAAGCTGAACCTCGGCACGCGCGAAATGTTCCGTGAAGACGAGCCAATGCCGCTCACCAGCGGCGAGTTCGCGGTGCTGAAAGCGCTGGTTAGCCACCCGCGTGAGCCGCTCTCCCGCGACAAGCTGATGAACCTGGCGCGTGGTCGCGAATACTCCGCAATGGAACGCTCTATCGACGTGCAGATCTCCCGTCTGCGCCGCATGGTGGAAGAAGATCCGGCGCATCCTCGTTATATTCAGACC
PROTEIN sequence
Length: 224
MQENYKILVVDDDMRLRALLERYLTEQGFQVRSVANAEQMDRLLTRESFHLMVLDLMLPGEDGLSICRRLRSQSNPMPIIMVTAKGEEVDRIVGLEIGADDYIPKPFNPRELLARIRAVLRRQANELPGAPSQEEAVIAFGKFKLNLGTREMFREDEPMPLTSGEFAVLKALVSHPREPLSRDKLMNLARGREYSAMERSIDVQISRLRRMVEEDPAHPRYIQT