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NECEvent2014_7_3_scaffold_138

Alias: 177_003_scaffold_138

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_7_3_scaffold_138_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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140..715
DNA (576bp) protein (192aa)
Transcriptional activator cadC n=2 Tax=Escherichia coli RepID=G2D7E5_ECOLX rbh
DNA-binding transcriptional activator CadC
Transcriptional regulatory protein, C-terminal domain protein {ECO:0000313|EMBL:EFJ85283.1}; TaxID=749533 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_7_3_scaffold_138_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1081..2415
DNA (1335bp) protein (445aa)
Probable cadaverine/lysine antiporter n=1294 Tax=Enterobacteriaceae RepID=CADB_ECO57 rbh
cadB; lysine/cadaverine antiporter
Basic amino acid/polyamine antiporter (APA) family transporter {ECO:0000313|EMBL:EOW14483.1}; TaxID=1182699 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriacea
NECEvent2014_7_3_scaffold_138_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2495..4642
DNA (2148bp) protein (716aa)
cadA; lysine decarboxylase 1 (EC:4.1.1.18)
Lysine decarboxylase, inducible n=797 Tax=Enterobacteriaceae RepID=LDCI_ECO57 rbh
Lysine decarboxylase, inducible {ECO:0000313|EMBL:ESD67187.1}; TaxID=1268996 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esche
NECEvent2014_7_3_scaffold_138_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4701..6158
DNA (1458bp) protein (486aa)
Probable dipeptide and tripeptide permease YjdL n=193 Tax=Escherichia RepID=YJDL_ECOLI rbh
yjdL; putative transporter
Inner membrane transporter YjdL {ECO:0000313|EMBL:EGI08092.1}; TaxID=656414 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
NECEvent2014_7_3_scaffold_138_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6395..7912
DNA (1518bp) protein (506aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
Lysine--tRNA ligase n=42 Tax=Escherichia coli RepID=A7ZUZ9_ECO24 rbh
lysyl-tRNA synthetase
NECEvent2014_7_3_scaffold_138_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8031..8204)
DNA (174bp) protein (58aa)
Uncharacterized protein YjdO n=1277 Tax=Enterobacteriaceae RepID=YJDO_ECO57
yjdO; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EZJ34144.1}; TaxID=1444258 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_138_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8232..8528)
DNA (297bp) protein (99aa)
Uncharacterized protein YjdK n=938 Tax=Enterobacteriaceae RepID=YJDK_ECO57
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESK27508.1}; TaxID=1281241 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_138_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8755..8952)
DNA (198bp) protein (66aa)
Uncharacterized protein n=2 Tax=Shigella RepID=I6CR73_SHIBO
yjdJ; putative acyltransferase with acyl-CoA N-acyltransferase domain
Uncharacterized protein {ECO:0000313|EMBL:KDV62390.1}; TaxID=1446581 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
NECEvent2014_7_3_scaffold_138_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9039..9269)
DNA (231bp) protein (77aa)
Uncharacterized protein n=2 Tax=Escherichia coli RepID=S1EG22_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOV73427.1}; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_7_3_scaffold_138_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9450..11081
DNA (1632bp) protein (544aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1182680 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
sensory histidine kinase DcuS (EC:2.7.13.3)
Sensory box sensor histidine kinase DcuS n=122 Tax=Enterobacteriaceae RepID=A8A7M2_ECOHS rbh
NECEvent2014_7_3_scaffold_138_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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11078..11797
DNA (720bp) protein (240aa)
Transcriptional regulatory protein DcuR n=1093 Tax=Enterobacteriaceae RepID=DCUR_ECO57 rbh
DcuR family transcriptional regulator
Transcriptional regulatory protein {ECO:0000256|PIRNR:PIRNR006171}; TaxID=1116032 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="
NECEvent2014_7_3_scaffold_138_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12368..13708
DNA (1341bp) protein (447aa)
Anaerobic C4-dicarboxylate transporter DcuB n=1353 Tax=Bacteria RepID=DCUB_ECO57 rbh
anaerobic C4-dicarboxylate transporter
Anaerobic C4-dicarboxylate transporter {ECO:0000256|PIRNR:PIRNR004539}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sour
NECEvent2014_7_3_scaffold_138_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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13786..15432
DNA (1647bp) protein (549aa)
Fumarase B= fumarate hydratase Class I anaerobic isozyme n=339 Tax=Enterobacteriaceae RepID=J7QB49_ECOLX rbh
fumarate hydratase FumB
Fumarate hydratase class I {ECO:0000313|EMBL:ESD65209.1}; TaxID=1268997 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
NECEvent2014_7_3_scaffold_138_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15555..16184
DNA (630bp) protein (210aa)
Uncharacterized protein n=55 Tax=Enterobacteriaceae RepID=H9UZU4_ECOLX rbh
hypothetical protein
Inner membrane protein yjdF {ECO:0000313|EMBL:END87002.1}; TaxID=1125642 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
NECEvent2014_7_3_scaffold_138_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(16323..17732)
DNA (1410bp) protein (470aa)
Melibiose carrier protein n=21 Tax=Escherichia coli RepID=B1LQD9_ECOSM rbh
melB; melibiose:sodium symporter
Sugar:sodium symporter {ECO:0000313|EMBL:ETE27057.1}; TaxID=1417796 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
NECEvent2014_7_3_scaffold_138_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17847..19202)
DNA (1356bp) protein (452aa)
Alpha-galactosidase {ECO:0000313|EMBL:ENB24177.1}; EC=3.2.1.22 {ECO:0000313|EMBL:ENB24177.1};; TaxID=1116116 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
Alpha-galactosidase n=149 Tax=Escherichia RepID=AGAL_ECOLI rbh
glycoside hydrolase family protein
NECEvent2014_7_3_scaffold_138_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19234..19329)
DNA (96bp) protein (32aa)
Uncharacterized protein n=1 Tax=Escherichia coli 90.0091 RepID=L0YFU6_ECOLX
Uncharacterized protein; TaxID=1005400 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 90.0091.;"
Displaying 17 items

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