ggKbase home page

NECEvent2014_7_3_scaffold_113_1

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: 98..1084

Top 3 Functional Annotations

Value Algorithm Source
Sigma 54 n=3 Tax=Escherichia coli RepID=K3J3T7_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 328.0
  • Bit_score: 643
  • Evalue 9.40e-182
  • rbh
lafK; Sigma 54 similarity KEGG
DB: KEGG
  • Identity: 99.7
  • Coverage: 328.0
  • Bit_score: 642
  • Evalue 7.70e-182
  • rbh
Bacterial regulatory , Fis family protein {ECO:0000313|EMBL:EMX33128.1}; TaxID=1116136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 328.0
  • Bit_score: 642
  • Evalue 3.80e-181

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 987
ATGTCTGAACTTATTGCAACTGCCGCTTCCAGCATTAACGCTTTTACTCTGGCAAAGCGTGTCGCCGCATTTAACGTGCCGGTGCTCATTCAGGGCGAAACCGGCGCGGGCAAAGAATGCGTGGCGAAATATATTCACACCGTAGCCTTTGGTGAAAATGATAACGCGCCCTATATCGGCGTGAACTGCGCGGCGATCCCAGAAAATATGCTGGAAGCGACCTTATTTGGCTACGACAAAGGCGCATTTACCGGCGCAATTGCCAGCGTACCTGGAAAAATGGAACTGGCGAATAACGGCACCTTATTGCTCGATGAAATTGGCGATATGCCGCTGGCATTACAGGCCAAAATATTACGCGTATTGCAGGAACAACAGGTTGAGCGATTAGGCAGCAACCGACAAATTAAACTCAATTTTCGCCTGATTGCCTGCACCAATAAAAACCTTGAGCAGGAAGTCGCCGCCGGGCGTTTTCGTGAAGATCTCTATTATCGTCTGGCGGTTATTCCTATTACCATGCCGCCGCTGCGCGAACGTCTGAACGATATTATTCCGCTGGCAGAGTCATTTATTAAAAAATACTCCACGGTGCTGGTGAAAAATATCACCCTTTCAGAATCTACCCGCCGGGCGCTGCTGAATTACCGCTGGCCCGGCAACGTGCGCCAGCTGGAAAACGCCATTCAGCGGGGAATGATCTTGAACCGCGACGGCGTGATTTACCCGGATGTCTTAGGCTTGCCGGAAACGGACGTTGCCGATCGCAGCGAACTGCAATGGCCTGTTCAGCCCGCCGTACACATTGCCGAAACCAGCGATTTAGGCCAGCACGGACGAAGCGCCCAGTATCAATATATCGCCGACCTGATGCGTAAATATCAGGGCAACCGCAGCAAAATCGCCGACCTGTTAGGCATTACCCCGCGCGCACTGCGCTATCGACTGGCCTCCATGCGCAAGCAAGGTATCGAAGTTTTCTCCTGA
PROTEIN sequence
Length: 329
MSELIATAASSINAFTLAKRVAAFNVPVLIQGETGAGKECVAKYIHTVAFGENDNAPYIGVNCAAIPENMLEATLFGYDKGAFTGAIASVPGKMELANNGTLLLDEIGDMPLALQAKILRVLQEQQVERLGSNRQIKLNFRLIACTNKNLEQEVAAGRFREDLYYRLAVIPITMPPLRERLNDIIPLAESFIKKYSTVLVKNITLSESTRRALLNYRWPGNVRQLENAIQRGMILNRDGVIYPDVLGLPETDVADRSELQWPVQPAVHIAETSDLGQHGRSAQYQYIADLMRKYQGNRSKIADLLGITPRALRYRLASMRKQGIEVFS*