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NECEvent2014_7_3_scaffold_137_1

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(1..111)

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 37.0
  • Bit_score: 77
  • Evalue 5.60e-12
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=3 Tax=Escherichia coli RepID=L3Y4X1_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 37.0
  • Bit_score: 77
  • Evalue 3.90e-12
rumA; 23S rRNA (uracil-5-)-methyltransferase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 37.0
  • Bit_score: 77
  • Evalue 1.10e-12

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 111
ATGGCGCAATTCTACTCTGCAAAACGACGCACGACGACGCGTCAGATCATAACCGTTTCAGTCAACGACCTCGACTCTTTTGGTCAGGGCGTGGCGCGACATAACGGCAAA
PROTEIN sequence
Length: 37
MAQFYSAKRRTTTRQIITVSVNDLDSFGQGVARHNGK