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NECEvent2014_7_3_scaffold_436_10

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(10453..10596)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=766150 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 47.0
  • Bit_score: 98
  • Evalue 2.30e-18
Pseudouridine synthase n=1 Tax=Escherichia coli P0304777.13 RepID=N3TVS3_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 47.0
  • Bit_score: 98
  • Evalue 1.60e-18
yjbC; 23S rRNA pseudouridine synthase F similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 47.0
  • Bit_score: 98
  • Evalue 4.60e-19

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Taxonomy

Shigella flexneri → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 144
AAACCTAAAGCGAAGGCCAAACCGAAAACAGCGGGCATCAAACGTCCAGTCGTTAAGATGGAAAAAACGGCGGAAAAAGGCGGTCGCCCGGCGTCCAACGGTAAGCGTTTTACCTCGCCGGGGCGTAAAAAGAAGGGACGCTGA
PROTEIN sequence
Length: 48
KPKAKAKPKTAGIKRPVVKMEKTAEKGGRPASNGKRFTSPGRKKKGR*