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NECEvent2014_7_3_scaffold_561_2

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(220..1236)

Top 3 Functional Annotations

Value Algorithm Source
RNA 3'-terminal phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200}; Short=RNA cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; Short=RNA-3'-phosphate cyclase {ECO:0000256|HAMAP-Rule:MF_00200};; EC=6.5.1.4 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 338.0
  • Bit_score: 658
  • Evalue 4.10e-186
RNA 3'-terminal phosphate cyclase n=11 Tax=Escherichia coli RepID=M8LHU5_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 338.0
  • Bit_score: 658
  • Evalue 2.90e-186
  • rbh
rtcA; RNA 3'-terminal-phosphate cyclase similarity KEGG
DB: KEGG
  • Identity: 99.4
  • Coverage: 338.0
  • Bit_score: 654
  • Evalue 1.20e-185

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGAAAAGGATGATTGCGCTGGATGGCGCACAGGGCGAAGGCGGCGGACAGATCCTGCGCTCGGCGCTGAGCCTGTCGATGATAACCGGCCAGCCATTTACCATCACTGGCATTCGTGCCGGGCGGGCAAAACCGGGGCTGCTGCGCCAGCATCTGACCGCGGTAAAAGCGGCTGCGGAAATTTGTAGGGCAATGGTGGAAGGTGCGGAGCTGGGATCGCAGCGTCTGCTCTTCCGGCCCGGCACCGTGCGCGGCGGCGATTACCGCTTTGCTATCGGTAGCGCCGGAAGTTGTACGCTGGTGCTGCAAACTGTGCTGCCCGCGCTGTGGTTTGCCGATGGACCTTCGCGTGTTGAAGTGAGCGGCGGTACCGATAACCCGTCGGCGCCACCTGCGGATTTTATCCGCCGGGTGCTGGAGCCGCTGCTGGCGAAAATGGGAATTCATCAGCAAACCACGCTGTTACGCCACGGTTTTTACCCTGCCGGAGGCGGTGTGGTGGCAACGGAAGTCTCGCCCGTTGCATCGTTTAACACCTTGCAACTTGGCGAGCGCGGGAACATTATGCAGATGCGTGGAGAAGTTCTATTAGCTGGTGTGCCGCGCCATGTTGCTGAGCGTGAAATCGCTACACTGGCGGGGAGTTTTTCCCTGCATGAACAGAATATTCATAACCTGCCGCGCGACCAGGGGCCGGGTAATACCGTCTCGCTTGAAGTCGAAAGTGAAAATATCACCGAACGCTTTTTTGTCGTCGGTGAAAAGCGCGTCAGTGCCGAGGTGGTTGCGGCACAGTTGGTGAAAGAGGTGAAACGCTACCTGGCAAGCACGGCGGCGGTGGGGGAATATCTTGCTGACCAACTGGTGCTACCGATGGCGCTGGCGGGCGCGGGGGAATTTACGGTCGCCCATCCCTCATGCCATCTGCTGACCAATATCGCGGTGGTGGAGCGTTTCTTGCCGGTGCGGTTTAGTTTGATAGAAACAGATGGCGTAACGCGGGTGAGCATTGAATGA
PROTEIN sequence
Length: 339
MKRMIALDGAQGEGGGQILRSALSLSMITGQPFTITGIRAGRAKPGLLRQHLTAVKAAAEICRAMVEGAELGSQRLLFRPGTVRGGDYRFAIGSAGSCTLVLQTVLPALWFADGPSRVEVSGGTDNPSAPPADFIRRVLEPLLAKMGIHQQTTLLRHGFYPAGGGVVATEVSPVASFNTLQLGERGNIMQMRGEVLLAGVPRHVAEREIATLAGSFSLHEQNIHNLPRDQGPGNTVSLEVESENITERFFVVGEKRVSAEVVAAQLVKEVKRYLASTAAVGEYLADQLVLPMALAGAGEFTVAHPSCHLLTNIAVVERFLPVRFSLIETDGVTRVSIE*