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NECEvent2014_7_3_scaffold_574_5

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: 6335..6607

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein HU-beta n=1404 Tax=Enterobacteriaceae RepID=DBHB_ECO57 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 90.0
  • Bit_score: 171
  • Evalue 3.80e-40
hupB; HU, DNA-binding transcriptional regulator subunit beta similarity KEGG
DB: KEGG
  • Identity: 98.9
  • Coverage: 90.0
  • Bit_score: 170
  • Evalue 3.10e-40
HU, DNA-binding transcriptional regulator, beta subunit {ECO:0000313|EMBL:CAQ90072.1}; TaxID=585054 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esche similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 90.0
  • Bit_score: 170
  • Evalue 1.50e-39

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Taxonomy

Escherichia fergusonii → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 273
GTGAATAAATCTCAATTGATCGACAAGATTGCTGCAGGGGCTGATATCTCTAAAGCTGCGGCTGGCCGTGCGTTAGATGCTATTATTGCTTCCGTAACTGAATCTCTGAAAGAAGGGGATGATGTAGCACTGGTAGGTTTTGGTACTTTTGCCGTTAAAGAGCGTGCTGCCCGTACTGGCCGCAACCCGCAGACCGGTAAAGAGATCACCATCGCTGCTGCTAAAGTACCGAGCTTCCGTGCAGGTAAAGCACTGAAAGACGCGGTAAACTAA
PROTEIN sequence
Length: 91
VNKSQLIDKIAAGADISKAAAGRALDAIIASVTESLKEGDDVALVGFGTFAVKERAARTGRNPQTGKEITIAAAKVPSFRAGKALKDAVN*