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NECEvent2014_7_3_scaffold_2617_3

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(1227..2054)

Top 3 Functional Annotations

Value Algorithm Source
AP endonuclease, family 2 n=1 Tax=Escherichia coli 5.0959 RepID=I2VU42_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 275.0
  • Bit_score: 566
  • Evalue 1.60e-158
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 275.0
  • Bit_score: 566
  • Evalue 4.50e-159
Xylose isomerase-like TIM barrel family protein {ECO:0000313|EMBL:EMU57062.1}; TaxID=1116132 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 275.0
  • Bit_score: 566
  • Evalue 2.20e-158

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
CAACGCCCGGATTTATTCAGTATCAATACCGCGACACTGGGCTATAAAACGCCGCTACCCGCCATTATTGATGCCTGCGCCGCACGCGGTATTGGCGCAATTGCCCCCTGGCGCAGGGAGTTGCAGGGTGAAGATCTCCAGCAAATCACCCGCCAGCTTGCCGCCAGTAACATGAGCGTTTCCGGTTTGTGCCGTAGCACTTACTACACCGCGCCGACACTGGCGGAACGCAAACTGGCGATTGATGATAACCGCCGGGCGCTGGACGACGCAGCGGTGCTTAACGCCGCCTGTTATATGCAGGTGGTTGGCGGTCTGCCAACGGGCACTAAAGATCTATATGAAGCGCGAGAACAAGTGAAACAAGGGATTCGCCAGTTGCTGCCACATTCGAAAGATGTCGGCGTGCCAATTGCGCTGGAGCCACTGCACCCGATGACAGCTGCCGATCGCTCTTGCCTGTGCACGTTACGTCAGGCGCTGGACTGGTGTGATGAACTCGATCCCGATGGTGAGTTTGGCCTCGGCGTGGCGGTGGATGTTTATCACGTCTGGTGGGATCCGGATCTCGCCAGTCAGATCCTGCGTGCTGGAAAACGCATCCTCGCGTTTCATGTTTCCGACTGGTTAGTACCGACCACCGATCTGGTCAATGACCGGGGAATGCCGGGAGATGGCGTCATCAATATTCCGTCAATTCGTCGGCTGGTTGAAAACGCCGGATTTAATGGCGCTATAGAACTGGAAATATTCTCGCCTTACTGGTGGCAGAAAGATATTAACAGCACGCTGGATATTAGCGTCGATCGCATCGCGCATTATTGTTAA
PROTEIN sequence
Length: 276
QRPDLFSINTATLGYKTPLPAIIDACAARGIGAIAPWRRELQGEDLQQITRQLAASNMSVSGLCRSTYYTAPTLAERKLAIDDNRRALDDAAVLNAACYMQVVGGLPTGTKDLYEAREQVKQGIRQLLPHSKDVGVPIALEPLHPMTAADRSCLCTLRQALDWCDELDPDGEFGLGVAVDVYHVWWDPDLASQILRAGKRILAFHVSDWLVPTTDLVNDRGMPGDGVINIPSIRRLVENAGFNGAIELEIFSPYWWQKDINSTLDISVDRIAHYC*