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NECEvent2014_7_3_scaffold_2709_3

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(1808..1960)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=8 Tax=Enterobacter cloacae complex RepID=F5S203_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 50.0
  • Bit_score: 102
  • Evalue 1.60e-19
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 50.0
  • Bit_score: 102
  • Evalue 4.40e-20
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 50.0
  • Bit_score: 102
  • Evalue 2.20e-19

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Taxonomy

Citrobacter youngae → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 153
GGTATCGATATGAACACCGACCACACGCTGGAAGAAGTGGGTAAACAGTTCGACGTTACCCGCGAACGTATCCGTCAGATCGAAGCGAAGGCGCTGCGCAAACTGCGTCACCCGAGCCGTTCTGAAGTGCTGCGTAGCTTCCTGGACGATTAA
PROTEIN sequence
Length: 51
GIDMNTDHTLEEVGKQFDVTRERIRQIEAKALRKLRHPSRSEVLRSFLDD*