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NECEvent2014_7_3_scaffold_2341_2

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: 710..1456

Top 3 Functional Annotations

Value Algorithm Source
CRISPR system CASCADE complex protein CasD n=5 Tax=Escherichia coli RepID=D7Y597_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 248.0
  • Bit_score: 524
  • Evalue 8.20e-146
  • rbh
CRISPR-associated protein cas5/casd, subtype I-e {ECO:0000313|EMBL:EOV56071.1}; TaxID=1182671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 248.0
  • Bit_score: 524
  • Evalue 1.20e-145
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 248.0
  • Bit_score: 513
  • Evalue 3.10e-143

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
ATGAGCCAATATCTGATTTTTCAGCTTCATGGGCCGATGGCGTCCTGGGGTGTCGATGCTCCAGGTGAAGTTCGTCATACCCATGAACTTCCTTCGCGCTCAGCATTGCTGGGGCTACTGGCTGCCGGGGTAGGGATTCGGCGTGATGATACCGAACGCTTAAACGCGTTTAATCGCCACTATTCACTGGTGGTTTGCGCCAGCCGTAACCCGCGCTGGGCACGGGATTATCACACAGTCCAGATGCCAAAAGAGGTGCGTAAAGCGCGTTATTTCAGCCGTCGCGAAGAGTTGAGCGACCCTGATCTTTTGAGCGCAATTATCTCCCGACGCGACTATTATACCGACGCCTGGTGGATGGTGGCGGTGGTACCAACCCCCGAAGCACCTTACAGCCTCGAACAGTTGCAGGACGGTTTACGCCATCCAGTTTTTCCGCTTTATCTGGGGCGAAAAAGTCATCCGCTGGCATTACCTCTTGCGCCGTTACTGCTCGAAGGCAACGCGTGTGATGCCTTATGTAATGCATACCAACAGTATCAGGATCATTTCCATAAACTGAAAGTCTCACTCCCGAAACTTCAGGATGAATGCTGGTGGGAAGGGAAACACGACGGCCTGGTCGCGAGCAAAATATTACGCCGCCGGGATGTTCCTTTAAATCGTCAGCAGTGGCTGTTTGGGGAACGCACCGTCAATCAGGGGCCGTGGCTCAGCAAGGAGGAACCATGTACCTCTCAAGAATAA
PROTEIN sequence
Length: 249
MSQYLIFQLHGPMASWGVDAPGEVRHTHELPSRSALLGLLAAGVGIRRDDTERLNAFNRHYSLVVCASRNPRWARDYHTVQMPKEVRKARYFSRREELSDPDLLSAIISRRDYYTDAWWMVAVVPTPEAPYSLEQLQDGLRHPVFPLYLGRKSHPLALPLAPLLLEGNACDALCNAYQQYQDHFHKLKVSLPKLQDECWWEGKHDGLVASKILRRRDVPLNRQQWLFGERTVNQGPWLSKEEPCTSQE*