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NECEvent2014_7_3_scaffold_3180_1

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(3..260)

Top 3 Functional Annotations

Value Algorithm Source
Proprionate catabolism activator, Fis family n=3 Tax=Escherichia coli RepID=B1J0U8_ECOLC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 86.0
  • Bit_score: 175
  • Evalue 3.20e-41
prpR; DNA-binding transcriptional activator PrpR similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 86.0
  • Bit_score: 175
  • Evalue 9.10e-42
Propionate catabolism operon regulatory protein PrpR {ECO:0000313|EMBL:EIH80518.1}; TaxID=869681 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheric similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 86.0
  • Bit_score: 175
  • Evalue 4.50e-41

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 258
ATGGCACATCCACCACGGCTTAATGACGACAAACCGGTTATCTGGACGGTATCTGTAACGCGCCTGTTCGAGCTGTTTCGCGATATCAGCCTCGAGTTTGATCACCTGGCGAACATTACCCCTATCCAGCTTGGCTTTGAAAAAGCGGTGACCTACATCCACAAGAAACTGGCAAACGAACGCTGTGACGCCATCATCGCCGCTGGATCTAACGGCGCGTACCTGAAAAGCCGCCTGTCAGTGCCAGTTATTTTGATT
PROTEIN sequence
Length: 86
MAHPPRLNDDKPVIWTVSVTRLFELFRDISLEFDHLANITPIQLGFEKAVTYIHKKLANERCDAIIAAGSNGAYLKSRLSVPVILI