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NECEvent2014_7_3_scaffold_3560_2

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: 413..1108

Top 3 Functional Annotations

Value Algorithm Source
CI protein n=13 Tax=Enterobacteriaceae RepID=D2A7V8_SHIF2 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 231.0
  • Bit_score: 482
  • Evalue 2.00e-133
  • rbh
CI protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 231.0
  • Bit_score: 482
  • Evalue 5.50e-134
  • rbh
CI protein {ECO:0000313|EMBL:ADA72653.1}; TaxID=591020 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri serotype X ( similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 231.0
  • Bit_score: 482
  • Evalue 2.70e-133

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Taxonomy

Shigella flexneri → Shigella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGATGGTTTTAGTACAGAGCGTAATAATAAGGATATGAAAATGAAATGGTATGAACTGGCTAGATCCAGAATGAAAGAGCTCGGCATAACTCAAGAGAAGTTGGCTGAAGAGCTTGGTATGACGCAGGGTGGAATTGGTCACTGGTTGCGCGGATCTCGTCATCCATCTCTTGACGAGATTGGTGTGGTGTTTAAATACCTTGGTATTGATAACGTCTCATTCAACCACGACGGTACATTTTCACCTGTTGGCGAATACTCATCTGCCCCCGTTAAAAAACAATATGAGTACCCTGTTTTTTCTCATGTTCAGGCCGGGATGTTCTCGCCTGAGCTTAGAACCTTTACCAAAGGTGATGCGGAGAGATGGGTCAGCACAACCAAAAAAGCCAGTGATTGTGCGTTTTGGCTTGAAGTTGAAGGTAATTCCATGACCGCACCAACAGGATCCAAGCCAAGCTTTCCTGACGGGATGTTAATTCTCGTTGACCCTGAGCAGGCTGTTGAGCCAGGTGATTTCTGCATAGCCAGACTTGGTGGTGACGAGTTTACCTTCAAGAAACTGATCAGGGATAGCGGTCAGGTGTTCCTACAGCCACTAAACCCGCAATATCCAATGATTCCATGCAATGATAGCTGTTCCGTAGTAGGGAAAGTTATCGCCAGCCAGTGGCCTGAAGAGACATTTAGTTAA
PROTEIN sequence
Length: 232
MDGFSTERNNKDMKMKWYELARSRMKELGITQEKLAEELGMTQGGIGHWLRGSRHPSLDEIGVVFKYLGIDNVSFNHDGTFSPVGEYSSAPVKKQYEYPVFSHVQAGMFSPELRTFTKGDAERWVSTTKKASDCAFWLEVEGNSMTAPTGSKPSFPDGMLILVDPEQAVEPGDFCIARLGGDEFTFKKLIRDSGQVFLQPLNPQYPMIPCNDSCSVVGKVIASQWPEETFS*