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NECEvent2014_7_3_scaffold_3589_2

Organism: NECEvent2014_7_3_Escherichia_coli_51_37_partial

partial RP 23 / 55 MC: 4 BSCG 24 / 51 MC: 1 ASCG 10 / 38 MC: 3
Location: comp(977..1291)

Top 3 Functional Annotations

Value Algorithm Source
Inner membrane protein yjcH n=7 Tax=Enterobacteriaceae RepID=C1MFJ7_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 206
  • Evalue 1.20e-50
Membrane protein {ECO:0000313|EMBL:KJC06478.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 104.0
  • Bit_score: 206
  • Evalue 1.70e-50
membrane protein similarity KEGG
DB: KEGG
  • Identity: 99.0
  • Coverage: 104.0
  • Bit_score: 204
  • Evalue 1.30e-50

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 315
ATGAATGACCAAATTTATCAGCGGATAGAAGACAGTGCGCGTTTCAGGGAGTTAGTAGAAAAACGGCAACGGTTTGCCACCATTCTGTCCATCATCATGCTGGCAGTTTATATCAGCTTTATTTTACTGATTGCCTTTGCGCCTGGCTGGCTGGGTACGCCGCTCCACGCGGGAACCAGCGTCACCCGGGGTATTCCGATTGGGGTCGGTGTGATCCTTATCTCCTTCATTCTGACCGGGATTTATATCTGGCGGGCAAACGGTGAATTTGATCGCCTGAACAATGCGGTTTTGCACGAGGTTAAAGCATCATGA
PROTEIN sequence
Length: 105
MNDQIYQRIEDSARFRELVEKRQRFATILSIIMLAVYISFILLIAFAPGWLGTPLHAGTSVTRGIPIGVGVILISFILTGIYIWRANGEFDRLNNAVLHEVKAS*