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NECEvent2014_8_1_scaffold_2742_3

Organism: NECEvent2014_8_1_Clostridium_paraputrificum_29_36

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(1141..1662)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=2 Tax=Clostridium botulinum B RepID=B2TNP3_CLOBB similarity UNIREF
DB: UNIREF100
  • Identity: 59.2
  • Coverage: 174.0
  • Bit_score: 233
  • Evalue 2.00e-58
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 59.2
  • Coverage: 174.0
  • Bit_score: 233
  • Evalue 5.70e-59
RNA polymerase sigma factor, sigma-70 family protein {ECO:0000313|EMBL:AIY80440.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clost similarity UNIPROT
DB: UniProtKB
  • Identity: 59.2
  • Coverage: 174.0
  • Bit_score: 233
  • Evalue 2.80e-58

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 522
ATGAGTGAAGTAAGTTCAGAAGAGATATTAGTATCAGTTTATAACGAAACCTATGAGGATATTTTTAAATATATATTATCGAAATGTAGAAATATAGATGATGTAGGCGATTTGGTTCAAAATACATACCTAAAGTTTTATAGAGCATTATCAAATAAAAATATAAAAGATTATAAAAAGTATCTTATTAGGATTGCAAGAAATGAGGTATATAGACATTACGGTATTTTAAAGCTCAGTCAAAATTTTATTCCTGTTTTTTCCTCAGAGAGCGAGGAAGAGTTTCTTAATTTAAAAACAGATTTAAAGGTTGAACACAACTATGATGAAAAGCTACTTTGTGATTCTATATGGAAATATTTAAAGGATAAGGACTCATTAACTCTTAAAATATTTATTTTATATTTTAGCAAGGATTTAAAAATAAAAGATATAGCTAATATATTAAAGGTTAATGAGTCTACTGTAAAAAATAGGCTCTATAGAACTATGAAAGAAATAAATAAGGAATTTAATTTGTAG
PROTEIN sequence
Length: 174
MSEVSSEEILVSVYNETYEDIFKYILSKCRNIDDVGDLVQNTYLKFYRALSNKNIKDYKKYLIRIARNEVYRHYGILKLSQNFIPVFSSESEEEFLNLKTDLKVEHNYDEKLLCDSIWKYLKDKDSLTLKIFILYFSKDLKIKDIANILKVNESTVKNRLYRTMKEINKEFNL*