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NECEvent2014_8_1_scaffold_931_4

Organism: NECEvent2014_8_1_Clostridium_butyricum_30_18

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(3961..5004)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2W2_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 347.0
  • Bit_score: 671
  • Evalue 3.40e-190
  • rbh
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:ENZ31041.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3. similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 347.0
  • Bit_score: 671
  • Evalue 4.80e-190
rpoN; putative RNA polymerase sigma-54 factor RpoN similarity KEGG
DB: KEGG
  • Identity: 73.4
  • Coverage: 346.0
  • Bit_score: 522
  • Evalue 9.40e-146

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1044
TACGAACAGTTATTAGAATCTGATGAAGAACAGTATACAATAATGATAGCTAAATATATTATTGAATCTTTGGATGGAAGAGGATATTTAGAAATATCAATGGAAGAATTAGCGACGGAATTAAGAATTTCTACAGATGACGTTGAAAAAGGATTAAAACTTGTTCAATCATTAGAACCTTATGGAATTGGTGCAAGAAATATAAAAGAATGTTTAATTATACAGAGTATTAATCTAAATATATTAGATGATAATATAGAAAGAATAATTTTAGATCATCTTGAAGAAGTAGCGGAAAACAAATATGAACTTATAGGAAAAGCATTGAAAATTTCACCTAGAGAGGCTCAAAGATATGGTGATATAATTAAAAAGTTAGAACCGAAACCTTCAAGAGGTTTTTATACGGGAGAAGAAGTAAGTTATATAATTCCTGATGCTGAAATCAAGAATATAGATGGAGAATTTTTTATCATAATGAATGAAGGCGTGCTTCCAAAGCTTATAATAAATAAAACTTACAGAGATGTTTTGAAAAATGGAAAAGATACTGAAATAAATAGCTATGTAAAAGAAAAAATTAATAAAGCAATGTTTTTGATAAAGGCTATAGATGATAGAAAAAATACTTTATATAAAGTTTTGGAATGTCTGATTGATAAACAAAAAGAATTTTTTGAAAGAGGATATTCATATATTAAGCCTTTAACATTACGAGAAGTTTCAAGTGAGCTGGATGTTCATGATTCTACTATAAGCAGAACCATTAAAGATAAGTATATATTGACAAGTTATGGAACTATTAAAATAAAGGATCTATTTCCAAGCGGAATAACTAATAATACATTAGAAGATTTATCTACTGTAAAAATAAAAAATGAAATAAAAAAGATTATACAAGAGGAAAATAAGAGCAAGCCATTATCAGATCAGTCTATAAGTCTTATATTAAAGGAGAATAATATTAAAATATCGAGACGAACAGTTGCAAAATATAGGGAAGAACTTGGGATAAAATCATCTTCTATGAGGAAAAGGTTATAA
PROTEIN sequence
Length: 348
YEQLLESDEEQYTIMIAKYIIESLDGRGYLEISMEELATELRISTDDVEKGLKLVQSLEPYGIGARNIKECLIIQSINLNILDDNIERIILDHLEEVAENKYELIGKALKISPREAQRYGDIIKKLEPKPSRGFYTGEEVSYIIPDAEIKNIDGEFFIIMNEGVLPKLIINKTYRDVLKNGKDTEINSYVKEKINKAMFLIKAIDDRKNTLYKVLECLIDKQKEFFERGYSYIKPLTLREVSSELDVHDSTISRTIKDKYILTSYGTIKIKDLFPSGITNNTLEDLSTVKIKNEIKKIIQEENKSKPLSDQSISLILKENNIKISRRTVAKYREELGIKSSSMRKRL*