ggKbase home page
Advanced Search
Search Help

NECEvent2014_8_1_scaffold_963_1

Organism: NECEvent2014_8_1_Clostridium_butyricum_30_18

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(220..4638)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA polymerase III PolC-type {ECO:0000256|HAMAP-Rule:MF_00356}; Short=PolIII {ECO:0000256|HAMAP-Rule:MF_00356};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00356};; TaxID=1523156 species="Bacteria; Firmicu similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2950
  • Evalue 0.0
DNA polymerase III polC-type n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AI68_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2950
  • Evalue 0.0
  • rbh
polC; DNA polymerase III (alpha subunit) similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 999.99
  • Bit_score: 2352
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. IBUN13A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 4419
ATGAAAAAAATCAATGAGGTTTTTAGTGATTACAAAAGTGAAGGCACCATAAATACTGCTATTGTTGAAAAAATAAAATTAAAAAAGAAAAGCAAAATACTTGAAATTGAAGTCAGTTCTGATAAGTATATTGAAATAAATGAAATTGAAGGACTTAACAATTTTATAAAAGAAAGATTCTTGCTAAATGAATCTAGAATAATTATTAATTATTCTGAAGAGGTTCATATAAGTCCAATTGAAAATGAGATGGATAACATATTATATACTTTATCTAATAGACATCCATATTTAAAAGCAGTGATAAATAATTGTGATTATGAAATAAAAGAAAATGAAATTAATTTTTGTTTTAATATGTCAGTATCGCATATGTTGAAAAATTTAAAATATGACAGTGAGATTCAAAAAGCAGTAAAGGATATTTATGGAAAAAATTATAGAATTAATTTTTGTGATAATGTAAGCAGTGAAGAACAGAATAAGTTAAATGAAGATAAAAAGAAAGAAGAGATGATTAGATTTCAAAAAGAAATCAAAGTTTCATCGGGAAGTTTTGAAACATCAGGAAATAGCAGCAAAGAAAAAAAATCTGAATCAAATAAAAATTCAGATGGGCAGGGTACATTTAACAAAGGTTTTTATCAAGCTAATGGAGGAGAATCAAAAAGTGAGGGAAAAAGCAATAAGAAAAATAATCCATTTCTTATTCTTGGTAGAAGTAGCAATATAAAAGAGAATATAGTTAAAATTATTGATATTACTCCTTATGAAGGTACAGTAGCAATTGAAGGTGAAATATCGAATATAGAAACAAAAGAACTGAGAAGTGGTAAGATACTTGTTTCTTTTGATTTATATGATGGATCAAGTTCAATGTGCTGTAAATCCTTCCTAAAACCTGAACAGAGTGATGAAGTAATATCAAAGCTAAAAAAGGCTAAAGGTGTGAGGCTTTGTGGTAATTCAGGTTATAGCAAGTTTTCTGGTGAGATAGAAATTATTGCTAATATAATAGTAGAGACAAATGGAATTAAAAGAGCAAAAAGAGTTGATAATTCAGAAGTAAAAAGAGTAGAGCTTCATATGCATACAAAGATGAGCCAGATGGATGCAATGTCTAGTGCAGGTGATCTTATAAAGAGAGCTATGAGCTGGGGAATGAAATCTATTGCAATAACAGATCATGGTGTTGTTCAGGCTTTTCCTGAAGCACATAAGCTCCTTGGAAGAGATAACCCTGATATGAAGATAATTTATGGAGTTGAAGCATATTTAGCACCAGATAAAAAACCTAACGTTAAAAATATAAAAGGTCAGAGCATTGATGATATATACTGTGTTCTTGATCTTGAAACCACAGGGTTTTCTCCAAAACTAGAAAAAATAACTGAAATAGGGATAATGAAAGTTAAGGATGGAAAAGTTATTGATAAATTCAGTACCTTTGTAAATCCAGAAAAACCTATACCGCCAAGGGTTGTTGAGGTTACAAATATAACTGATGATATGGTAAGAAATGCAGAAACAATAGATAAAGTATTTCCTAAAATGCTTGAATTCATAGAAGGAAGTATTCTTGTCGCTCATAATGCAGAGTTTGATATTGGATTTTTAAGGCATTATGCTAAAGTTTTAGGGCATGACTTTGATTTCACATATCTTGATACACTATCTCTTGCTCAGGATCTTTTTCCACAATACAAAAGCTATAAACTTGGAAGAATAGCCAAGAATTTAGGAATAAAAGTTGAAGTTGCACATAGAGCACTTGATGATGTTGATACCACTGTTAAAGTATTCAATGTAATGATTGATATGCTTAAGGAGAGAGGTGCAAAGACTCTTTCAGATATTGAGACATATGCTTGTGATGAAGAATCAAAAAAGGTTCAGTATAAAAAACTAAGAACACATCATGCTATAATACTTGCAAAAGATTATACTGGATTAAAGAACCTGTATAAGCTTGTATCATATTCGCACCTTGATTATTTTTATAAAAAACCACGTATACTAAAAAGTATGTTTAAAAAATATTCAGAAGGACTCATACTTGGAAGCGCATGTAGTGAAGGGGAGCTATTTCAATCAATACTTCTTGGAAAGTCTGATGAAGAAATTGAAAATATAGCTAAGGATTATGATTATCTTGAAATACAACCTATTGGAAATGATGATTATTTAATTAGAAATGAGCAGGTTCCAAACAAGGAATATATAAAAGAAATAAATAGAAAGATAATAAGTCTTGGTGAAAAGCTTGGAAAGCTTGTTGTTGCAACTGGAGATGTTCATTTCATGGATCCAGAAGATGAAATATACAGACGTATACTTGAAGCCGGCCAGGGATTTAAGGATGCAGATATGCAGGCACCATTATATTTAAAGACAACTGAAGAAATGCTTGAAGAGTTTTCCTATTTAGGAGAAGAAAAGGCTTATGAAGTTGTTGTTACTAATACAAATAAAATTTCAGAAATGTGTGAACAGATAAGTCCTATTTCGCCGGAAAAGTGTCCACCTCATATTGATGGATGTGAACAGACAATAAAGGACATAGCTTATGGAAAAGCACATGAATTATATGGAGAAAATCTCCCTAAAATAGTTAAAGACAGACTTGAGAAGGAGCTTGACTCAATAATTAAAAATGGATTTTCTGTTATGTATATAATTGCTCAGAAGCTTGTATGGAAATCTAATGATGATGGATATCTTGTTGGTTCAAGAGGTTCTGTTGGTTCATCAGTAGTTGCATATATGACGGGTATTACTGAAGTTAATGCACTTCCGCCTCATTACAGATGTCCTAAATGTAAATATTCTGATTTTAATGATTATGGATCTAAAAATGGGTTTGACCTTCCAGATAAGGTATGTCCAGCGTGTGGAGAAAACATGGATAAGGATGGAATGGATATACCCTTTGAAACATTCCTTGGATTTAATGGAGATAAGGAACCGGATATAGATTTAAATTTCTCGGGAGAATATCAGGCAAAAGCTCATAAATATACAGAAGTTATATTTGGAAAAGGAACAACGTTTAAGGCTGGTACAATTGGAACAATTGCAGAAAAAACAGCATTTGGATATGTGAAAAAATATTATGAAGAAAAAAGTCAAACTATAACTAAGGCTGAAATAACAAGAATTGCTAAGGGATGTACTGGAATAAAAAGAACTACAGGACAGCATCCTGGAGGTATAATTGTTGTTCCAAAAGGAAGGGAGATTTTTGAATTTTGTCCAGTTCAGCATCCAGCAGATGATCCTGATTCTGATATTATAACAACACATTTTGATTATCACTCAATTGACCAGAATCTTCTTAAACTTGATATACTTGGCCATGATGATCCCACTGTAATCAGAATGCTTCAAGATATTACTGGAATAAATCCACACACTATACCATTGGATGATAAAGAAACAATGTCTTTATTTTCATCAACAACAGCTCTTGGTGTAACCCCAGAGCAGATAAATTCAAAAGTTGGTACTTTTGGGATACCTGAGTTTGGAACAAAATTTGTAAGAGGAATGCTTGTAGATACACTTCCAAAAACATTCTCTGATTTATTGTGTATATCTGGTCTTTCTCATGGTACTGATGTATGGCTTGGTAATGCCAAGGATTTAATTGATACAGGAGTAATTACAAGTATCAGTGATGCTGTATGTTGTAGAGATGATATCATGGTTTATCTTATTAAGATGAATCTTCCTCCAAATACTGCCTTTAAAATAATGGAACTTGTGCGTAAAGGGCAGGCTTTAAAAAATCCAGAAAAATGGGCAGAATATGAAGCACTTATGAGAGAAAATGATGTTCCAGAATGGTATATAGATTCGTGCAAAAAAATTAAATACATGTTCCCAAAGGCCCATGCAGCAGCATATGTAATGATGGCATTTAGAATTGCATGGTTTAAGGTACACATACCTAAGGCTTATTATGCAGCATATTTTTCAATAAGAGCAAAGGCTTTTGACGCAGAATTTATGATATTTGGAAAAGACAGAGTAAAAGAAAAAATGGCAGAAATATTAGCACAAGGAAATGATGCAGCACCAAAGGATAAGGATATGTATGACGATTTAGAAATAGTACTTGAAATGTATGAAAGAGGATTTAAATTCTTGCCAATAGATTTATATAAATCTGATGCAACCAAATTTAAAGTTGAAGAAGAAGGCTTAAGGCCGCCTTTAAATAGTATTGCAGGAATGGGAAGTGTAGCGGCAGAATCAATATATGCGGCTGTTCATGAAATAGAGCCAATAAGTTCTGTAGATAATTTAAAGAAGCGTGCCAAAATAGGTAATTCTGCTACTGACTTGTTAAGAAAATTTGGTTGCTTAAATGGTATGCAGGAAAGTGATCAGGTAAGTTTTTTTGATATGATAAGCTGA
PROTEIN sequence
Length: 1473
MKKINEVFSDYKSEGTINTAIVEKIKLKKKSKILEIEVSSDKYIEINEIEGLNNFIKERFLLNESRIIINYSEEVHISPIENEMDNILYTLSNRHPYLKAVINNCDYEIKENEINFCFNMSVSHMLKNLKYDSEIQKAVKDIYGKNYRINFCDNVSSEEQNKLNEDKKKEEMIRFQKEIKVSSGSFETSGNSSKEKKSESNKNSDGQGTFNKGFYQANGGESKSEGKSNKKNNPFLILGRSSNIKENIVKIIDITPYEGTVAIEGEISNIETKELRSGKILVSFDLYDGSSSMCCKSFLKPEQSDEVISKLKKAKGVRLCGNSGYSKFSGEIEIIANIIVETNGIKRAKRVDNSEVKRVELHMHTKMSQMDAMSSAGDLIKRAMSWGMKSIAITDHGVVQAFPEAHKLLGRDNPDMKIIYGVEAYLAPDKKPNVKNIKGQSIDDIYCVLDLETTGFSPKLEKITEIGIMKVKDGKVIDKFSTFVNPEKPIPPRVVEVTNITDDMVRNAETIDKVFPKMLEFIEGSILVAHNAEFDIGFLRHYAKVLGHDFDFTYLDTLSLAQDLFPQYKSYKLGRIAKNLGIKVEVAHRALDDVDTTVKVFNVMIDMLKERGAKTLSDIETYACDEESKKVQYKKLRTHHAIILAKDYTGLKNLYKLVSYSHLDYFYKKPRILKSMFKKYSEGLILGSACSEGELFQSILLGKSDEEIENIAKDYDYLEIQPIGNDDYLIRNEQVPNKEYIKEINRKIISLGEKLGKLVVATGDVHFMDPEDEIYRRILEAGQGFKDADMQAPLYLKTTEEMLEEFSYLGEEKAYEVVVTNTNKISEMCEQISPISPEKCPPHIDGCEQTIKDIAYGKAHELYGENLPKIVKDRLEKELDSIIKNGFSVMYIIAQKLVWKSNDDGYLVGSRGSVGSSVVAYMTGITEVNALPPHYRCPKCKYSDFNDYGSKNGFDLPDKVCPACGENMDKDGMDIPFETFLGFNGDKEPDIDLNFSGEYQAKAHKYTEVIFGKGTTFKAGTIGTIAEKTAFGYVKKYYEEKSQTITKAEITRIAKGCTGIKRTTGQHPGGIIVVPKGREIFEFCPVQHPADDPDSDIITTHFDYHSIDQNLLKLDILGHDDPTVIRMLQDITGINPHTIPLDDKETMSLFSSTTALGVTPEQINSKVGTFGIPEFGTKFVRGMLVDTLPKTFSDLLCISGLSHGTDVWLGNAKDLIDTGVITSISDAVCCRDDIMVYLIKMNLPPNTAFKIMELVRKGQALKNPEKWAEYEALMRENDVPEWYIDSCKKIKYMFPKAHAAAYVMMAFRIAWFKVHIPKAYYAAYFSIRAKAFDAEFMIFGKDRVKEKMAEILAQGNDAAPKDKDMYDDLEIVLEMYERGFKFLPIDLYKSDATKFKVEEEGLRPPLNSIAGMGSVAAESIYAAVHEIEPISSVDNLKKRAKIGNSATDLLRKFGCLNGMQESDQVSFFDMIS*