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NECEvent2014_8_1_scaffold_2373_1

Organism: NECEvent2014_8_1_Clostridium_butyricum_30_18

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 2..736

Top 3 Functional Annotations

Value Algorithm Source
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000 similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 244.0
  • Bit_score: 487
  • Evalue 1.20e-134
aroE1; shikimate dehydrogenase AroE (EC:1.1.1.25) similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 243.0
  • Bit_score: 367
  • Evalue 2.70e-99
Shikimate dehydrogenase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AU10_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 244.0
  • Bit_score: 487
  • Evalue 8.40e-135
  • rbh

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 735
TTAAATATTGATGGCGCATATAAAATATTTGAAGTAGAAAAAAAAGATATCAGTAAATTGTGTGATTCATTAAGAATTTTAAAAATTAAAGGTACTAATGTGACGATACCTTATAAGCAAGAAGTTATGAAATATCTTGATTCAATTTCAGAAGAAGCAGAAAAAATAGGTGCTGTTAATACAATCTATTTAAAAGATGGAAAGTTATATGGATATAATTCTGATTACTTTGGATTTGGAACTATTATAAAGAAATATGATGTAGAACTTGAAGGTAAAATTACTATGGTTTTAGGGACAGGAGGAGCATCAAAGGCTGTAGTTACATACCTGCTTGATAAAGGTGTAAAAAAAATATATTTAGTATCAAGAAATCATAAAAATGAATCTGATTATAAAGATGATAGAGTAGAGTATACAACTTATGAAGAGATAGAAGAAATTAAAGGTGATGTTATTATTAATACAACTCCAGTAGGTATGTATCCAAAGACAGGAGTAAGCCCTGTAGGAGAGAGTATTATAAAAAACTTTGATACATTGATAGATATAATTTATAATCCAAGAGTAACTGAATTTTTAGCAATTGGGGAAAAATTAAATAAAAAGGTATGTGGTGGTCTTGAAATGTTAGTAGGTCAGGCAATCAAGTCTGAAGAAGTATGGCAGGAAATGGATATAGATGATGAGGTTTTTGATAAAGTATTTTCTAAAATAAATGAAAACTTTAAATAA
PROTEIN sequence
Length: 245
LNIDGAYKIFEVEKKDISKLCDSLRILKIKGTNVTIPYKQEVMKYLDSISEEAEKIGAVNTIYLKDGKLYGYNSDYFGFGTIIKKYDVELEGKITMVLGTGGASKAVVTYLLDKGVKKIYLVSRNHKNESDYKDDRVEYTTYEEIEEIKGDVIINTTPVGMYPKTGVSPVGESIIKNFDTLIDIIYNPRVTEFLAIGEKLNKKVCGGLEMLVGQAIKSEEVWQEMDIDDEVFDKVFSKINENFK*