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NECEvent2014_8_1_scaffold_1743_3

Organism: NECEvent2014_8_1_Clostridium_butyricum_30_18

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(1694..2608)

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 304.0
  • Bit_score: 612
  • Evalue 3.00e-172
ylyB; RNA pseudouridine synthase YlyB (EC:5.4.99.-) similarity KEGG
DB: KEGG
  • Identity: 78.9
  • Coverage: 303.0
  • Bit_score: 507
  • Evalue 2.70e-141
Pseudouridine synthase n=2 Tax=Clostridium butyricum RepID=M8K6V2_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 304.0
  • Bit_score: 612
  • Evalue 2.20e-172
  • rbh

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Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 915
ATGGAAAAGACATTAATTAAAGTTGATGAACAAGACGAAGGTCTTAGAATAGATAAATATTTATCAAATATATTTAAAGATAAATCACGATCTTTTATTCAAGGATTAATAGAAAAGGAAAATGTTAAAGTTAATAGCAAATCACTAAAAAGTAATTATAAATTAAAAAAGGCTGACGAAATTGAAATAATGATACCAGAACCTGAAATACTAAGTGTTGAAGCTGAAAATATACCTATTGATATTGTTTATGAGGATGAAGATGTTATAGTAGTTAATAAAGCACAAGGAATGGTTGTTCATCCTGCACCAGGAAACTATAATGGTACATTAGTAAATGCATTACTTTATCATTGTAAAGACTTGTCAAGTATAAATGGAGTGATAAGGCCAGGTATTGTACATAGAATTGATAAGGATACATCAGGAATTCTTGTTATTGCAAAAAATGATGATGCGCATAATAAATTAAGTGAGCAATTAAAAGATCATTCAATGAAAAGAGAGTATTATGCTCTAATTGAAGGAAGACTAAAAAATAATGATGGAACTATTGATAAACCCTTAGGAAGATGTAAGAAAGATAGATTAAAAATAGGAATAATAGAAGATGGTAAGAGAGCTGTGACTCATTATGAAGTGGTTGAAAGATATAATGGATATACACTTGTGAAATGTGTCTTAGAAACAGGAAGAACCCATCAAATAAGAGTTCATATGGCATCTATAGGTTTTCCTCTTGTTGGAGATCCATTGTATGGATTTAAGAGACAAAAATTTAAACTTGAGGGACAGGTACTTCATGCAAGAACATTAGGATTTATACATCCTAGAACTGGTGAGTATATGGAATTTACAAGTGAACTTCCACAATACTTTTGCGATTTAATAAATAAACTGAAAAACGAAATGTAG
PROTEIN sequence
Length: 305
MEKTLIKVDEQDEGLRIDKYLSNIFKDKSRSFIQGLIEKENVKVNSKSLKSNYKLKKADEIEIMIPEPEILSVEAENIPIDIVYEDEDVIVVNKAQGMVVHPAPGNYNGTLVNALLYHCKDLSSINGVIRPGIVHRIDKDTSGILVIAKNDDAHNKLSEQLKDHSMKREYYALIEGRLKNNDGTIDKPLGRCKKDRLKIGIIEDGKRAVTHYEVVERYNGYTLVKCVLETGRTHQIRVHMASIGFPLVGDPLYGFKRQKFKLEGQVLHARTLGFIHPRTGEYMEFTSELPQYFCDLINKLKNEM*