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NECEvent2014_8_1_Clostridium_butyricum_30_18

NECEvent2014_8_1_Clostridium_30_17
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 1-50 of 1170 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_4173 178_001_scaffold_4173
Species: Clostridium sp. IBUN125C (100%)
2 1111 bp 25.11 2.97 81.28
NECEvent2014_8_1_scaffold_4300 178_001_scaffold_4300
Species: Clostridium sp. IBUN13A (50%)
2 1078 bp 28.48 3.48 86.55
NECEvent2014_8_1_scaffold_4546 178_001_scaffold_4546
Species: Clostridium sp. IBUN13A (100%)
1 1017 bp 27.43 3.54 99.71
NECEvent2014_8_1_scaffold_4599 178_001_scaffold_4599
Species: Streptococcus equi (50%)
2 1003 bp 38.68 3.59 83.15
NECEvent2014_8_1_scaffold_4139 178_001_scaffold_4139
Species: Clostridium butyricum (100%)
2 1120 bp 24.20 4.02 97.50
NECEvent2014_8_1_scaffold_3327 178_001_scaffold_3327
Species: Clostridium sp. IBUN125C (100%)
2 1406 bp 24.75 4.05 96.02
NECEvent2014_8_1_scaffold_3537 178_001_scaffold_3537
Species: Clostridium sp. IBUN125C (100%)
2 1317 bp 25.74 4.10 77.90
NECEvent2014_8_1_scaffold_3374 178_001_scaffold_3374
Species: Clostridium sp. IBUN125C (50%)
2 1388 bp 25.07 4.11 97.05
NECEvent2014_8_1_scaffold_4467 178_001_scaffold_4467
Species: Clostridium butyricum (50%)
2 1035 bp 28.21 4.35 86.09
NECEvent2014_8_1_scaffold_3960 178_001_scaffold_3960
Species: Clostridium butyricum (100%)
2 1171 bp 25.02 4.36 85.31
NECEvent2014_8_1_scaffold_3396 178_001_scaffold_3396
Species: Clostridium butyricum (100%)
3 1378 bp 26.85 4.57 98.40
NECEvent2014_8_1_scaffold_4375 178_001_scaffold_4375
Species: Streptococcus sp. C150 (100%)
1 1059 bp 36.07 4.82 98.58
NECEvent2014_8_1_scaffold_4376 178_001_scaffold_4376
Species: Clostridium butyricum (100%)
1 1059 bp 27.57 4.82 98.58
NECEvent2014_8_1_scaffold_4227 178_001_scaffold_4227
Species: Clostridium sp. IBUN13A (100%)
2 1098 bp 23.77 4.92 98.91
NECEvent2014_8_1_scaffold_4548 178_001_scaffold_4548
Species: Clostridium sp. IBUN13A (100%)
1 1017 bp 22.03 5.01 99.71
NECEvent2014_8_1_scaffold_1806 178_001_scaffold_1806
Species: Clostridium butyricum (66.67%)
3 2638 bp 24.98 5.12 81.88
NECEvent2014_8_1_scaffold_3372 178_001_scaffold_3372
Species: Clostridium sp. IBUN125C (100%)
1 1389 bp 26.85 5.18 99.78
NECEvent2014_8_1_scaffold_4086 178_001_scaffold_4086
Species: Clostridium butyricum (100%)
1 1138 bp 27.33 5.27 99.91
NECEvent2014_8_1_scaffold_2913 178_001_scaffold_2913
Species: Clostridium sp. IBUN125C (100%)
1 1622 bp 26.63 5.36 73.43
NECEvent2014_8_1_scaffold_2472 178_001_scaffold_2472
Species: Clostridium sp. IBUN125C (75%)
4 1903 bp 26.27 5.36 88.60
NECEvent2014_8_1_scaffold_4473 178_001_scaffold_4473
Species: Clostridium sp. IBUN125C (50%)
2 1034 bp 24.85 5.37 81.82
NECEvent2014_8_1_scaffold_2773 178_001_scaffold_2773
Species: Clostridium sp. IBUN125C (100%)
3 1705 bp 26.98 5.45 94.31
NECEvent2014_8_1_scaffold_2790 178_001_scaffold_2790
Species: Clostridium sp. IBUN125C (100%)
2 1693 bp 26.52 5.49 104.73
NECEvent2014_8_1_scaffold_4324 178_001_scaffold_4324
Species: Clostridium sp. IBUN125C (100%)
2 1073 bp 28.05 5.59 81.08
NECEvent2014_8_1_scaffold_3874 178_001_scaffold_3874
Species: Clostridium butyricum (66.67%)
3 1198 bp 26.88 5.63 92.65
NECEvent2014_8_1_scaffold_3655 178_001_scaffold_3655
Species: Clostridium sp. IBUN125C (100%)
1 1274 bp 26.06 5.65 99.84
NECEvent2014_8_1_scaffold_3567 178_001_scaffold_3567
Species: Clostridium sp. IBUN125C (100%)
2 1306 bp 24.96 5.74 57.66
NECEvent2014_8_1_scaffold_2308 178_001_scaffold_2308
Species: Clostridium sp. IBUN125C (66.67%)
3 2036 bp 25.93 5.75 87.23
NECEvent2014_8_1_scaffold_4136 178_001_scaffold_4136
Species: Clostridium butyricum (100%)
1 1121 bp 23.19 5.89 99.82
NECEvent2014_8_1_scaffold_4553 178_001_scaffold_4553
Species: Clostridium butyricum (50%)
2 1015 bp 23.65 5.91 46.70
NECEvent2014_8_1_scaffold_3119 178_001_scaffold_3119
Species: Clostridium sp. IBUN22A (66.67%)
3 1504 bp 25.20 5.98 76.99
NECEvent2014_8_1_scaffold_2209 178_001_scaffold_2209
Species: Clostridium sp. IBUN125C (100%)
3 2147 bp 26.04 6.01 85.79
NECEvent2014_8_1_scaffold_3742 178_001_scaffold_3742
Species: Clostridium butyricum (100%)
1 1243 bp 25.99 6.03 71.44
NECEvent2014_8_1_scaffold_3602 178_001_scaffold_3602
Species: Clostridium butyricum (50%)
2 1291 bp 26.49 6.04 94.58
NECEvent2014_8_1_scaffold_2969 178_001_scaffold_2969
Species: Clostridium saccharoperbutylacetonicum (50%)
2 1585 bp 29.91 6.06 67.38
NECEvent2014_8_1_scaffold_3209 178_001_scaffold_3209
Species: Clostridium butyricum (50%)
2 1455 bp 28.32 6.08 65.77
NECEvent2014_8_1_scaffold_4271 178_001_scaffold_4271
Species: Clostridium sp. IBUN13A (100%)
2 1085 bp 26.18 6.08 82.95
NECEvent2014_8_1_scaffold_3096 178_001_scaffold_3096
Species: Clostridium sp. IBUN125C (100%)
1 1515 bp 27.52 6.14 76.83
NECEvent2014_8_1_scaffold_3304 178_001_scaffold_3304
Species: Clostridium butyricum (50%)
2 1417 bp 23.08 6.14 100.35
NECEvent2014_8_1_scaffold_3440 178_001_scaffold_3440
Genus: Clostridium (100%)
3 1359 bp 26.49 6.18 88.74
NECEvent2014_8_1_scaffold_3016 178_001_scaffold_3016
Species: Clostridium sp. IBUN125C (50%)
2 1554 bp 27.16 6.18 100.58
NECEvent2014_8_1_scaffold_2106 178_001_scaffold_2106
Species: Clostridium sp. IBUN125C (100%)
2 2249 bp 27.48 6.20 94.71
NECEvent2014_8_1_scaffold_2894 178_001_scaffold_2894
Species: Clostridium butyricum (50%)
2 1631 bp 25.26 6.25 93.07
NECEvent2014_8_1_scaffold_3371 178_001_scaffold_3371
Species: Clostridium butyricum (100%)
2 1389 bp 24.55 6.26 94.60
NECEvent2014_8_1_scaffold_2660 178_001_scaffold_2660
Species: Clostridium sp. IBUN125C (50%)
2 1769 bp 26.51 6.27 87.68
NECEvent2014_8_1_scaffold_2248 178_001_scaffold_2248
Species: Clostridium butyricum (66.67%)
3 2099 bp 28.16 6.29 90.04
NECEvent2014_8_1_scaffold_4434 178_001_scaffold_4434
Species: Clostridium butyricum (100%)
1 1045 bp 25.45 6.32 89.00
NECEvent2014_8_1_scaffold_4091 178_001_scaffold_4091
Species: Clostridium butyricum (50%)
2 1137 bp 25.33 6.33 63.32
NECEvent2014_8_1_scaffold_3520 178_001_scaffold_3520
Species: Clostridium butyricum (100%)
3 1325 bp 29.13 6.34 98.72
NECEvent2014_8_1_scaffold_2776 178_001_scaffold_2776
Species: Clostridium sp. IBUN125C (50%)
2 1703 bp 27.54 6.34 84.20
Displaying items 1-50 of 1170 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.