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NECEvent2014_8_1_Clostridium_butyricum_30_18

NECEvent2014_8_1_Clostridium_30_17
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 951-1000 of 1170 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_3384 178_001_scaffold_3384
Genus: Clostridium (100%)
3 1385 bp 26.79 8.23 81.23
NECEvent2014_8_1_scaffold_4188 178_001_scaffold_4188
Genus: Clostridium (66.67%)
3 1108 bp 28.25 21.53 81.23
NECEvent2014_8_1_scaffold_1777 178_001_scaffold_1777
Species: Clostridium sp. IBUN125C (50%)
4 2677 bp 29.73 11.88 81.14
NECEvent2014_8_1_scaffold_4324 178_001_scaffold_4324
Species: Clostridium sp. IBUN125C (100%)
2 1073 bp 28.05 5.59 81.08
NECEvent2014_8_1_scaffold_4206 178_001_scaffold_4206
Species: Clostridium butyricum (100%)
1 1103 bp 27.02 7.07 81.05
NECEvent2014_8_1_scaffold_1585 178_001_scaffold_1585
Species: Clostridium butyricum (50%)
4 2992 bp 29.38 16.84 81.02
NECEvent2014_8_1_scaffold_3431 178_001_scaffold_3431
Species: Clostridium sp. IBUN125C (100%)
2 1363 bp 28.10 8.36 81.00
NECEvent2014_8_1_scaffold_2187 178_001_scaffold_2187
Species: Clostridium sp. IBUN13A (50%)
2 2175 bp 28.23 14.28 80.97
NECEvent2014_8_1_scaffold_530 178_001_scaffold_530
Genus: Clostridium (90%)
10 8350 bp 29.14 21.27 80.95
NECEvent2014_8_1_scaffold_1712 178_001_scaffold_1712
Species: Clostridium butyricum (100%)
1 2765 bp 29.37 19.37 80.94
NECEvent2014_8_1_scaffold_738 178_001_scaffold_738
Species: Clostridium butyricum (60%)
5 6353 bp 28.38 18.46 80.89
NECEvent2014_8_1_scaffold_2939 178_001_scaffold_2939
Species: Clostridium sp. IBUN125C (100%)
2 1606 bp 28.39 11.02 80.88
NECEvent2014_8_1_scaffold_1940 178_001_scaffold_1940
Species: Clostridium butyricum (66.67%)
3 2454 bp 31.66 19.44 80.85
NECEvent2014_8_1_scaffold_2333 178_001_scaffold_2333
Species: Clostridium sp. IBUN13A (100%)
1 2015 bp 26.90 9.75 80.84
NECEvent2014_8_1_scaffold_2062 178_001_scaffold_2062
Species: Clostridium butyricum (66.67%)
3 2303 bp 29.61 10.42 80.76
NECEvent2014_8_1_scaffold_4523 178_001_scaffold_4523
Species: Clostridium butyricum (100%)
2 1023 bp 29.03 8.80 80.65
NECEvent2014_8_1_scaffold_4138 178_001_scaffold_4138
Species: Clostridium sp. IBUN125C (50%)
2 1120 bp 26.07 6.43 80.63
NECEvent2014_8_1_scaffold_4418 178_001_scaffold_4418
Species: Clostridium butyricum (100%)
1 1050 bp 28.57 12.43 80.57
NECEvent2014_8_1_scaffold_2895 178_001_scaffold_2895
Species: Clostridium sp. IBUN125C (100%)
1 1631 bp 29.61 16.00 80.56
NECEvent2014_8_1_scaffold_3475 178_001_scaffold_3475
Species: Clostridium sp. IBUN125C (100%)
1 1345 bp 30.26 24.31 80.52
NECEvent2014_8_1_scaffold_3488 178_001_scaffold_3488
Species: Clostridium butyricum (100%)
1 1339 bp 27.48 11.20 80.43
NECEvent2014_8_1_scaffold_2272 178_001_scaffold_2272
Species: Clostridium butyricum (50%)
4 2075 bp 29.01 11.49 80.39
NECEvent2014_8_1_scaffold_1382 178_001_scaffold_1382
Species: Clostridium sp. IBUN125C (50%)
4 3471 bp 28.75 10.54 80.38
NECEvent2014_8_1_scaffold_2810 178_001_scaffold_2810
Species: Clostridium butyricum (100%)
2 1681 bp 28.32 10.26 80.31
NECEvent2014_8_1_scaffold_675 178_001_scaffold_675
Genus: Clostridium (100%)
6 6804 bp 29.60 11.84 80.29
NECEvent2014_8_1_scaffold_2914 178_001_scaffold_2914
Species: Clostridium butyricum (100%)
1 1622 bp 30.15 13.69 80.27
NECEvent2014_8_1_scaffold_808 178_001_scaffold_808
Species: Clostridium butyricum (71.43%)
7 5773 bp 28.53 14.13 80.18
NECEvent2014_8_1_scaffold_1881 178_001_scaffold_1881
Species: Clostridium sp. IBUN125C (66.67%)
3 2530 bp 28.38 10.79 80.16
NECEvent2014_8_1_scaffold_854 178_001_scaffold_854
Species: Clostridium butyricum (66.67%)
3 5441 bp 29.20 15.99 80.11
NECEvent2014_8_1_scaffold_2422 178_001_scaffold_2422
Species: Clostridium sp. IBUN125C (100%)
2 1940 bp 25.67 9.74 80.10
NECEvent2014_8_1_scaffold_2091 178_001_scaffold_2091
Species: Clostridium butyricum (50%)
2 2275 bp 31.82 24.79 80.04
NECEvent2014_8_1_scaffold_1373 178_001_scaffold_1373
Species: Clostridium sp. IBUN125C (100%)
3 3502 bp 29.90 13.24 80.01
NECEvent2014_8_1_scaffold_3075 178_001_scaffold_3075
Species: Clostridium sp. IBUN125C (50%)
2 1524 bp 29.20 10.43 79.92
NECEvent2014_8_1_scaffold_2687 178_001_scaffold_2687
Species: Clostridium butyricum (66.67%)
3 1753 bp 27.61 17.97 79.92
NECEvent2014_8_1_scaffold_2360 178_001_scaffold_2360
Species: Clostridium butyricum (100%)
1 1990 bp 27.29 10.25 79.90
NECEvent2014_8_1_scaffold_1549 178_001_scaffold_1549
Species: Clostridium butyricum (75%)
4 3061 bp 26.53 9.70 79.78
NECEvent2014_8_1_scaffold_2503 178_001_scaffold_2503
Species: Clostridium sp. IBUN125C (50%)
4 1886 bp 28.58 6.36 79.69
NECEvent2014_8_1_scaffold_1674 178_001_scaffold_1674
Species: Clostridium butyricum (75%)
4 2843 bp 28.17 16.78 79.56
NECEvent2014_8_1_scaffold_2567 178_001_scaffold_2567
Species: Clostridium sp. IBUN125C (100%)
2 1833 bp 27.39 8.51 79.54
NECEvent2014_8_1_scaffold_1413 178_001_scaffold_1413
Species: Clostridium butyricum (66.67%)
3 3374 bp 27.42 11.29 79.49
NECEvent2014_8_1_scaffold_1340 178_001_scaffold_1340
Species: Clostridium sp. IBUN125C (75%)
4 3590 bp 28.44 9.44 79.47
NECEvent2014_8_1_scaffold_4207 178_001_scaffold_4207
Species: Clostridium butyricum (100%)
1 1103 bp 30.10 9.79 79.42
NECEvent2014_8_1_scaffold_2296 178_001_scaffold_2296
Genus: Clostridium (75%)
4 2048 bp 26.07 6.74 79.39
NECEvent2014_8_1_scaffold_2244 178_001_scaffold_2244
Species: Clostridium butyricum (50%)
2 2102 bp 29.35 14.84 79.35
NECEvent2014_8_1_scaffold_587 178_001_scaffold_587
Genus: Clostridium (88.89%)
9 7645 bp 29.10 20.54 79.35
NECEvent2014_8_1_scaffold_1384 178_001_scaffold_1384
Species: Clostridium butyricum (66.67%)
3 3470 bp 26.02 9.34 79.28
NECEvent2014_8_1_scaffold_2823 178_001_scaffold_2823
Species: Clostridium sp. IBUN125C (50%)
2 1673 bp 25.94 6.81 79.26
NECEvent2014_8_1_scaffold_1879 178_001_scaffold_1879
Species: Clostridium butyricum (75%)
4 2532 bp 30.41 17.48 79.15
NECEvent2014_8_1_scaffold_4485 178_001_scaffold_4485
Species: Clostridium butyricum (50%)
2 1031 bp 27.45 9.02 79.15
NECEvent2014_8_1_scaffold_2708 178_001_scaffold_2708
Genus: Clostridium (100%)
3 1740 bp 28.51 7.93 79.14
Displaying items 951-1000 of 1170 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.