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NECEvent2014_8_1_Clostridium_butyricum_30_18

NECEvent2014_8_1_Clostridium_30_17
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 1051-1100 of 1170 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_2459 178_001_scaffold_2459
Species: Clostridium sp. IBUN125C (50%)
2 1911 bp 30.35 16.33 97.96
NECEvent2014_8_1_scaffold_2550 178_001_scaffold_2550
Species: Clostridium butyricum (100%)
1 1846 bp 27.84 9.91 98.00
NECEvent2014_8_1_scaffold_1865 178_001_scaffold_1865
Species: Clostridium butyricum (66.67%)
3 2550 bp 27.18 9.29 98.00
NECEvent2014_8_1_scaffold_3303 178_001_scaffold_3303
Species: Clostridium sp. IBUN13A (100%)
1 1417 bp 30.84 23.08 98.02
NECEvent2014_8_1_scaffold_2691 178_001_scaffold_2691
Species: Clostridium sp. IBUN125C (75%)
4 1753 bp 27.44 7.36 98.06
NECEvent2014_8_1_scaffold_2322 178_001_scaffold_2322
Species: Clostridium sp. IBUN125C (100%)
1 2025 bp 29.43 10.22 98.07
NECEvent2014_8_1_scaffold_2005 178_001_scaffold_2005
Species: Clostridium sp. IBUN125C (100%)
1 2373 bp 30.93 15.23 98.10
NECEvent2014_8_1_scaffold_3575 178_001_scaffold_3575
Species: Clostridium butyricum (100%)
1 1302 bp 29.03 11.64 98.16
NECEvent2014_8_1_scaffold_1294 178_001_scaffold_1294
Genus: Clostridium (100%)
3 3687 bp 29.73 10.90 98.21
NECEvent2014_8_1_scaffold_1667 178_001_scaffold_1667
Species: Clostridium butyricum (100%)
2 2853 bp 28.32 12.83 98.21
NECEvent2014_8_1_scaffold_2768 178_001_scaffold_2768
Species: Clostridium sp. IBUN125C (50%)
2 1707 bp 30.87 14.24 98.24
NECEvent2014_8_1_scaffold_3800 178_001_scaffold_3800
Species: Clostridium butyricum (100%)
2 1224 bp 27.86 12.01 98.28
NECEvent2014_8_1_scaffold_3396 178_001_scaffold_3396
Species: Clostridium butyricum (100%)
3 1378 bp 26.85 4.57 98.40
NECEvent2014_8_1_scaffold_1514 178_001_scaffold_1514
Species: Clostridium butyricum (50%)
6 3149 bp 28.96 15.20 98.41
NECEvent2014_8_1_scaffold_1455 178_001_scaffold_1455
Species: Clostridium sp. IBUN125C (100%)
4 3277 bp 29.57 15.06 98.41
NECEvent2014_8_1_scaffold_1003 178_001_scaffold_1003
Species: Clostridium sp. IBUN125C (50%)
2 4632 bp 29.51 19.49 98.51
NECEvent2014_8_1_scaffold_4375 178_001_scaffold_4375
Species: Streptococcus sp. C150 (100%)
1 1059 bp 36.07 4.82 98.58
NECEvent2014_8_1_scaffold_4376 178_001_scaffold_4376
Species: Clostridium butyricum (100%)
1 1059 bp 27.57 4.82 98.58
NECEvent2014_8_1_scaffold_1977 178_001_scaffold_1977
Species: Clostridium butyricum (100%)
3 2413 bp 29.05 10.38 98.59
NECEvent2014_8_1_scaffold_3520 178_001_scaffold_3520
Species: Clostridium butyricum (100%)
3 1325 bp 29.13 6.34 98.72
NECEvent2014_8_1_scaffold_423 178_001_scaffold_423
Species: Clostridium sp. IBUN125C (100%)
1 9787 bp 30.13 17.63 98.73
NECEvent2014_8_1_scaffold_3614 178_001_scaffold_3614
Species: Clostridium butyricum (50%)
2 1288 bp 30.05 9.55 98.76
NECEvent2014_8_1_scaffold_3839 178_001_scaffold_3839
Species: Clostridium sp. IBUN125C (100%)
2 1209 bp 26.80 7.69 98.76
NECEvent2014_8_1_scaffold_4093 178_001_scaffold_4093
Species: Clostridium butyricum (100%)
1 1136 bp 31.60 20.86 98.77
NECEvent2014_8_1_scaffold_4341 178_001_scaffold_4341
Species: Clostridium perfringens (50%)
2 1069 bp 30.59 10.10 98.78
NECEvent2014_8_1_scaffold_4237 178_001_scaffold_4237
Species: Clostridium sp. IBUN13A (100%)
1 1096 bp 29.11 10.68 98.81
NECEvent2014_8_1_scaffold_395 178_001_scaffold_395
Species: Clostridium butyricum (75%)
8 10219 bp 32.22 19.93 98.85
NECEvent2014_8_1_scaffold_2259 178_001_scaffold_2259
Species: Clostridium butyricum (100%)
3 2088 bp 30.94 19.90 98.85
NECEvent2014_8_1_scaffold_1578 178_001_scaffold_1578
Species: Clostridium butyricum (100%)
3 3004 bp 27.70 10.04 98.87
NECEvent2014_8_1_scaffold_2224 178_001_scaffold_2224
Species: Clostridium butyricum (100%)
2 2127 bp 26.75 7.69 98.87
NECEvent2014_8_1_scaffold_2522 178_001_scaffold_2522
Species: Clostridium butyricum (50%)
2 1866 bp 26.05 9.65 98.87
NECEvent2014_8_1_scaffold_3065 178_001_scaffold_3065
Species: Clostridium butyricum (50%)
2 1526 bp 33.36 25.16 98.89
NECEvent2014_8_1_scaffold_4227 178_001_scaffold_4227
Species: Clostridium sp. IBUN13A (100%)
2 1098 bp 23.77 4.92 98.91
NECEvent2014_8_1_scaffold_765 178_001_scaffold_765
Genus: Clostridium (100%)
6 6110 bp 29.39 14.90 98.94
NECEvent2014_8_1_scaffold_546 178_001_scaffold_546
Species: Clostridium butyricum (50%)
8 8150 bp 31.23 22.53 98.94
NECEvent2014_8_1_scaffold_1252 178_001_scaffold_1252
Species: Clostridium sp. IBUN125C (50%)
2 3835 bp 30.33 11.50 98.96
NECEvent2014_8_1_scaffold_3203 178_001_scaffold_3203
Species: Clostridium sp. IBUN13A (50%)
2 1458 bp 26.61 10.91 98.97
NECEvent2014_8_1_scaffold_2356 178_001_scaffold_2356
Species: Clostridium butyricum (100%)
3 1997 bp 27.29 9.24 99.00
NECEvent2014_8_1_scaffold_3807 178_001_scaffold_3807
Species: Clostridium sp. IBUN13A (100%)
1 1221 bp 34.97 31.57 99.02
NECEvent2014_8_1_scaffold_1356 178_001_scaffold_1356
Species: Clostridium butyricum (100%)
2 3535 bp 31.29 15.45 99.04
NECEvent2014_8_1_scaffold_2599 178_001_scaffold_2599
Species: Clostridium sp. IBUN125C (100%)
1 1811 bp 29.82 11.10 99.06
NECEvent2014_8_1_scaffold_2096 178_001_scaffold_2096
Species: Clostridium butyricum (100%)
2 2262 bp 30.11 16.71 99.07
NECEvent2014_8_1_scaffold_1425 178_001_scaffold_1425
Species: Clostridium butyricum (100%)
4 3346 bp 27.91 9.50 99.07
NECEvent2014_8_1_scaffold_2199 178_001_scaffold_2199
Species: Clostridium sp. IBUN125C (50%)
2 2159 bp 25.71 10.98 99.07
NECEvent2014_8_1_scaffold_772 178_001_scaffold_772
Species: Clostridium butyricum (100%)
1 6071 bp 29.83 12.90 99.13
NECEvent2014_8_1_scaffold_4470 178_001_scaffold_4470
Species: Clostridium sp. IBUN125C (100%)
1 1035 bp 28.70 10.14 99.13
NECEvent2014_8_1_scaffold_2375 178_001_scaffold_2375
Species: Clostridium sp. IBUN125C (66.67%)
3 1973 bp 30.11 11.86 99.14
NECEvent2014_8_1_scaffold_2268 178_001_scaffold_2268
Species: Clostridium butyricum (50%)
2 2081 bp 29.65 11.03 99.18
NECEvent2014_8_1_scaffold_3573 178_001_scaffold_3573
Species: Clostridium sp. IBUN13A (50%)
2 1303 bp 28.70 8.98 99.23
NECEvent2014_8_1_scaffold_1863 178_001_scaffold_1863
Genus: Clostridium (66.67%)
3 2553 bp 29.65 14.92 99.29
Displaying items 1051-1100 of 1170 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.