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NECEvent2014_8_1_Clostridium_butyricum_30_18

NECEvent2014_8_1_Clostridium_30_17
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 251-300 of 1170 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_1409 178_001_scaffold_1409
Species: Clostridium sp. IBUN125C (50%)
4 3390 bp 30.12 23.14 71.15
NECEvent2014_8_1_scaffold_2691 178_001_scaffold_2691
Species: Clostridium sp. IBUN125C (75%)
4 1753 bp 27.44 7.36 98.06
NECEvent2014_8_1_scaffold_902 178_001_scaffold_902
Species: Clostridium sp. IBUN125C (50%)
4 5188 bp 28.72 10.99 86.04
NECEvent2014_8_1_scaffold_1926 178_001_scaffold_1926
Species: Clostridium butyricum (50%)
4 2476 bp 28.23 14.60 90.87
NECEvent2014_8_1_scaffold_649 178_001_scaffold_649
Species: Clostridium butyricum (50%)
4 7054 bp 29.35 15.42 84.25
NECEvent2014_8_1_scaffold_1417 178_001_scaffold_1417
Genus: Clostridium (50%)
4 3364 bp 29.46 18.19 95.51
NECEvent2014_8_1_scaffold_1674 178_001_scaffold_1674
Species: Clostridium butyricum (75%)
4 2843 bp 28.17 16.78 79.56
NECEvent2014_8_1_scaffold_2188 178_001_scaffold_2188
Species: Clostridium butyricum (75%)
4 2172 bp 30.20 24.45 78.45
NECEvent2014_8_1_scaffold_1167 178_001_scaffold_1167
Species: Clostridium sp. IBUN13A (50%)
4 4059 bp 29.64 13.53 88.91
NECEvent2014_8_1_scaffold_1425 178_001_scaffold_1425
Species: Clostridium butyricum (100%)
4 3346 bp 27.91 9.50 99.07
NECEvent2014_8_1_scaffold_1428 178_001_scaffold_1428
Species: Clostridium sp. IBUN125C (75%)
4 3335 bp 29.42 11.78 93.64
NECEvent2014_8_1_scaffold_1174 178_001_scaffold_1174
Species: Clostridium butyricum (50%)
4 4041 bp 29.75 19.23 82.63
NECEvent2014_8_1_scaffold_1944 178_001_scaffold_1944
Species: Clostridium butyricum (50%)
4 2452 bp 26.26 7.34 84.91
NECEvent2014_8_1_scaffold_1695 178_001_scaffold_1695
Species: Clostridium butyricum (50%)
4 2802 bp 31.12 15.47 92.93
NECEvent2014_8_1_scaffold_1186 178_001_scaffold_1186
Species: Clostridium butyricum (75%)
4 4013 bp 29.53 12.90 90.23
NECEvent2014_8_1_scaffold_931 178_001_scaffold_931
Species: Clostridium sp. IBUN125C (75%)
4 5005 bp 30.95 34.32 85.53
NECEvent2014_8_1_scaffold_1187 178_001_scaffold_1187
Species: Clostridium butyricum (75%)
4 4010 bp 27.43 13.09 92.47
NECEvent2014_8_1_scaffold_1188 178_001_scaffold_1188
Species: Clostridium sp. IBUN125C (50%)
4 4009 bp 31.38 18.22 96.83
NECEvent2014_8_1_scaffold_1446 178_001_scaffold_1446
Species: Clostridium butyricum (50%)
4 3300 bp 27.79 13.05 88.91
NECEvent2014_8_1_scaffold_935 178_001_scaffold_935
Species: Clostridium butyricum (50%)
4 5001 bp 29.79 18.96 94.72
NECEvent2014_8_1_scaffold_2472 178_001_scaffold_2472
Species: Clostridium sp. IBUN125C (75%)
4 1903 bp 26.27 5.36 88.60
NECEvent2014_8_1_scaffold_1450 178_001_scaffold_1450
Species: Clostridium butyricum (100%)
4 3291 bp 28.14 13.99 91.80
NECEvent2014_8_1_scaffold_1196 178_001_scaffold_1196
Species: Clostridium butyricum (75%)
4 3994 bp 30.35 19.53 87.06
NECEvent2014_8_1_scaffold_1197 178_001_scaffold_1197
Species: Clostridium butyricum (50%)
4 3991 bp 28.69 13.30 81.26
NECEvent2014_8_1_scaffold_1455 178_001_scaffold_1455
Species: Clostridium sp. IBUN125C (100%)
4 3277 bp 29.57 15.06 98.41
NECEvent2014_8_1_scaffold_1200 178_001_scaffold_1200
Species: Clostridium butyricum (50%)
4 3986 bp 30.38 18.03 90.54
NECEvent2014_8_1_scaffold_1456 178_001_scaffold_1456
Species: Clostridium butyricum (100%)
4 3277 bp 27.28 10.57 82.94
NECEvent2014_8_1_scaffold_1457 178_001_scaffold_1457
Species: Clostridium butyricum (100%)
4 3273 bp 28.78 10.68 86.71
NECEvent2014_8_1_scaffold_1970 178_001_scaffold_1970
Species: Clostridium sp. IBUN125C (50%)
4 2420 bp 30.29 12.09 78.84
NECEvent2014_8_1_scaffold_2229 178_001_scaffold_2229
Species: Clostridium sp. IBUN125C (75%)
4 2122 bp 27.24 6.79 73.09
NECEvent2014_8_1_scaffold_1206 178_001_scaffold_1206
Genus: Clostridium (75%)
4 3975 bp 29.23 11.32 96.38
NECEvent2014_8_1_scaffold_695 178_001_scaffold_695
Species: Clostridium sp. IBUN13A (75%)
4 6636 bp 29.81 21.25 92.27
NECEvent2014_8_1_scaffold_954 178_001_scaffold_954
Species: Clostridium sp. IBUN125C (50%)
4 4901 bp 29.30 14.94 93.16
NECEvent2014_8_1_scaffold_1212 178_001_scaffold_1212
Species: Clostridium butyricum (50%)
4 3955 bp 31.28 28.37 82.45
NECEvent2014_8_1_scaffold_1216 178_001_scaffold_1216
Species: Clostridium sp. IBUN125C (50%)
4 3936 bp 29.19 15.47 93.60
NECEvent2014_8_1_scaffold_964 178_001_scaffold_964
Species: Clostridium sp. IBUN125C (50%)
4 4866 bp 27.66 10.67 84.83
NECEvent2014_8_1_scaffold_2503 178_001_scaffold_2503
Species: Clostridium sp. IBUN125C (50%)
4 1886 bp 28.58 6.36 79.69
NECEvent2014_8_1_scaffold_3019 178_001_scaffold_3019 4 1552 bp 30.99 22.91 76.29
NECEvent2014_8_1_scaffold_1741 178_001_scaffold_1741
Species: Clostridium butyricum (100%)
4 2723 bp 27.03 10.08 49.80
NECEvent2014_8_1_scaffold_721 178_001_scaffold_721
Species: Clostridium sp. IBUN125C (100%)
4 6461 bp 32.08 24.61 95.28
NECEvent2014_8_1_scaffold_1746 178_001_scaffold_1746
Species: Clostridium sp. IBUN125C (50%)
4 2714 bp 27.16 8.84 78.81
NECEvent2014_8_1_scaffold_1242 178_001_scaffold_1242
Species: Clostridium sp. IBUN13A (100%)
4 3863 bp 31.43 15.61 93.58
NECEvent2014_8_1_scaffold_1756 178_001_scaffold_1756
Species: Clostridium sp. IBUN125C (50%)
4 2702 bp 29.20 13.77 87.93
NECEvent2014_8_1_scaffold_1757 178_001_scaffold_1757
Species: Clostridium butyricum (50%)
4 2701 bp 26.84 7.94 81.97
NECEvent2014_8_1_scaffold_734 178_001_scaffold_734
Species: Clostridium butyricum (100%)
4 6368 bp 30.45 24.54 90.50
NECEvent2014_8_1_scaffold_1247 178_001_scaffold_1247
Species: Clostridium sp. IBUN125C (75%)
4 3849 bp 29.88 12.00 88.07
NECEvent2014_8_1_scaffold_736 178_001_scaffold_736
Species: Clostridium butyricum (100%)
4 6367 bp 27.47 13.00 96.97
NECEvent2014_8_1_scaffold_2272 178_001_scaffold_2272
Species: Clostridium butyricum (50%)
4 2075 bp 29.01 11.49 80.39
NECEvent2014_8_1_scaffold_994 178_001_scaffold_994
Species: Clostridium butyricum (50%)
4 4680 bp 30.68 28.46 78.80
NECEvent2014_8_1_scaffold_997 178_001_scaffold_997
Species: Clostridium butyricum (100%)
4 4663 bp 27.88 13.70 90.01
Displaying items 251-300 of 1170 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.