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NECEvent2014_8_1_Clostridium_butyricum_30_18

NECEvent2014_8_1_Clostridium_30_17
In projects: NECEvent2014_8_1

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 301-350 of 1170 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_1099 178_001_scaffold_1099
Species: Clostridium butyricum (100%)
2 4272 bp 29.87 15.94 94.45
NECEvent2014_8_1_scaffold_1743 178_001_scaffold_1743
Genus: Clostridium (100%)
3 2719 bp 30.12 19.92 94.45
NECEvent2014_8_1_scaffold_840 178_001_scaffold_840
Species: Clostridium butyricum (66.67%)
3 5556 bp 29.68 15.98 94.44
NECEvent2014_8_1_scaffold_1179 178_001_scaffold_1179
Species: Clostridium butyricum (80%)
5 4029 bp 28.32 10.54 94.42
NECEvent2014_8_1_scaffold_3659 178_001_scaffold_3659
Species: Clostridium sp. IBUN125C (100%)
2 1271 bp 28.56 8.38 94.41
NECEvent2014_8_1_scaffold_3835 178_001_scaffold_3835
Species: Clostridium sp. IBUN125C (50%)
2 1211 bp 30.39 11.15 94.38
NECEvent2014_8_1_scaffold_3503 178_001_scaffold_3503
Species: Clostridium butyricum (100%)
1 1332 bp 30.48 10.70 94.37
NECEvent2014_8_1_scaffold_3287 178_001_scaffold_3287
Species: Clostridium butyricum (50%)
2 1425 bp 30.67 8.21 94.32
NECEvent2014_8_1_scaffold_2773 178_001_scaffold_2773
Species: Clostridium sp. IBUN125C (100%)
3 1705 bp 26.98 5.45 94.31
NECEvent2014_8_1_scaffold_3264 178_001_scaffold_3264
Species: Clostridium sp. IBUN125C (50%)
2 1435 bp 31.57 11.39 94.29
NECEvent2014_8_1_scaffold_3247 178_001_scaffold_3247
Species: Clostridium sp. IBUN125C (100%)
1 1442 bp 33.01 31.21 94.24
NECEvent2014_8_1_scaffold_3928 178_001_scaffold_3928
Species: human gut metagenome (100%)
1 1181 bp 25.83 9.91 94.24
NECEvent2014_8_1_scaffold_3992 178_001_scaffold_3992
Species: Clostridium sp. IBUN125C (100%)
1 1162 bp 30.72 11.88 94.23
NECEvent2014_8_1_scaffold_708 178_001_scaffold_708
Genus: Clostridium (100%)
7 6549 bp 30.14 14.66 94.23
NECEvent2014_8_1_scaffold_1317 178_001_scaffold_1317
Species: Clostridium sp. IBUN125C (66.67%)
3 3633 bp 30.22 13.71 94.22
NECEvent2014_8_1_scaffold_2038 178_001_scaffold_2038
Species: Clostridium sp. IBUN22A (50%)
2 2334 bp 26.78 7.71 94.22
NECEvent2014_8_1_scaffold_508 178_001_scaffold_508
Species: Clostridium butyricum (66.67%)
6 8653 bp 29.23 17.72 94.16
NECEvent2014_8_1_scaffold_2171 178_001_scaffold_2171
Species: Clostridium perfringens (50%)
2 2192 bp 31.34 12.80 94.16
NECEvent2014_8_1_scaffold_3035 178_001_scaffold_3035
Species: Clostridium butyricum (100%)
2 1543 bp 26.12 7.58 94.10
NECEvent2014_8_1_scaffold_1528 178_001_scaffold_1528
Species: Clostridium butyricum (66.67%)
3 3115 bp 27.99 10.69 94.09
NECEvent2014_8_1_scaffold_1433 178_001_scaffold_1433
Species: Clostridium sp. IBUN125C (100%)
3 3329 bp 29.11 11.35 94.08
NECEvent2014_8_1_scaffold_1298 178_001_scaffold_1298
Species: Clostridium butyricum (50%)
2 3680 bp 28.97 10.43 94.08
NECEvent2014_8_1_scaffold_3146 178_001_scaffold_3146
Species: Clostridium sp. IBUN125C (100%)
1 1487 bp 29.79 8.68 94.01
NECEvent2014_8_1_scaffold_1016 178_001_scaffold_1016
Species: Clostridium butyricum (100%)
1 4573 bp 30.18 17.55 94.01
NECEvent2014_8_1_scaffold_1097 178_001_scaffold_1097
Species: Clostridium butyricum (50%)
2 4274 bp 30.14 19.23 93.99
NECEvent2014_8_1_scaffold_3435 178_001_scaffold_3435
Species: Clostridium sp. IBUN22A (100%)
1 1360 bp 31.18 19.63 93.97
NECEvent2014_8_1_scaffold_3040 178_001_scaffold_3040
Species: Clostridium butyricum (100%)
1 1539 bp 26.84 8.38 93.96
NECEvent2014_8_1_scaffold_1378 178_001_scaffold_1378
Species: Clostridium butyricum (50%)
2 3475 bp 30.53 15.76 93.93
NECEvent2014_8_1_scaffold_769 178_001_scaffold_769
Genus: Clostridium (87.5%)
8 7127 bp 32.26 47.25 93.88
NECEvent2014_8_1_scaffold_1594 178_001_scaffold_1594
Species: Clostridium sp. IBUN125C (66.67%)
3 2975 bp 28.17 10.99 93.88
NECEvent2014_8_1_scaffold_2890 178_001_scaffold_2890
Species: Clostridium sp. IBUN13A (60%)
5 1633 bp 26.64 8.45 93.88
NECEvent2014_8_1_scaffold_2190 178_001_scaffold_2190
Species: Clostridium butyricum (100%)
1 2170 bp 30.55 15.35 93.87
NECEvent2014_8_1_scaffold_2794 178_001_scaffold_2794
Species: Clostridium butyricum (100%)
2 1691 bp 31.11 14.19 93.85
NECEvent2014_8_1_scaffold_2524 178_001_scaffold_2524
Species: Clostridium butyricum (50%)
2 1865 bp 29.01 13.99 93.78
NECEvent2014_8_1_scaffold_814 178_001_scaffold_814
Species: Clostridium butyricum (100%)
6 5712 bp 30.06 13.92 93.75
NECEvent2014_8_1_scaffold_1702 178_001_scaffold_1702
Species: Clostridium sp. IBUN125C (100%)
1 2789 bp 28.18 11.67 93.69
NECEvent2014_8_1_scaffold_1018 178_001_scaffold_1018
Species: Clostridium butyricum (80%)
5 4557 bp 28.81 16.19 93.68
NECEvent2014_8_1_scaffold_1086 178_001_scaffold_1086
Genus: Clostridium (100%)
6 4289 bp 29.70 19.38 93.66
NECEvent2014_8_1_scaffold_1428 178_001_scaffold_1428
Species: Clostridium sp. IBUN125C (75%)
4 3335 bp 29.42 11.78 93.64
NECEvent2014_8_1_scaffold_1635 178_001_scaffold_1635
Species: Clostridium butyricum (75%)
4 2909 bp 27.16 7.84 93.64
NECEvent2014_8_1_scaffold_507 178_001_scaffold_507
Species: Clostridium butyricum (66.67%)
9 8659 bp 30.92 24.29 93.61
NECEvent2014_8_1_scaffold_1216 178_001_scaffold_1216
Species: Clostridium sp. IBUN125C (50%)
4 3936 bp 29.19 15.47 93.60
NECEvent2014_8_1_scaffold_3485 178_001_scaffold_3485
Species: Clostridium butyricum (100%)
1 1340 bp 29.40 7.84 93.58
NECEvent2014_8_1_scaffold_880 178_001_scaffold_880
Species: Clostridium butyricum (66.67%)
3 5312 bp 30.44 14.74 93.58
NECEvent2014_8_1_scaffold_1242 178_001_scaffold_1242
Species: Clostridium sp. IBUN13A (100%)
4 3863 bp 31.43 15.61 93.58
NECEvent2014_8_1_scaffold_2454 178_001_scaffold_2454
Species: Clostridium sp. IBUN125C (100%)
1 1914 bp 28.89 16.14 93.57
NECEvent2014_8_1_scaffold_2264 178_001_scaffold_2264
Species: Clostridium butyricum (50%)
2 2084 bp 29.22 20.15 93.57
NECEvent2014_8_1_scaffold_1941 178_001_scaffold_1941
Species: Clostridium butyricum (100%)
3 2453 bp 28.74 7.22 93.56
NECEvent2014_8_1_scaffold_1891 178_001_scaffold_1891
Species: Clostridium sp. IBUN125C (100%)
2 2514 bp 31.62 13.96 93.56
NECEvent2014_8_1_scaffold_3357 178_001_scaffold_3357
Species: Clostridium butyricum (100%)
1 1395 bp 28.32 7.85 93.55
Displaying items 301-350 of 1170 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.