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NECEvent2014_8_1_scaffold_441_9

Organism: NECEvent2014_8_1_Clostridium_perfringens-rel_30_12

near complete RP 47 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 7742..9490

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000255|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 583.0
  • Bit_score: 1167
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 583.0
  • Bit_score: 1167
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BJT2_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 583.0
  • Bit_score: 1168
  • Evalue 0.0

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1749
TTGTTCGAATTAAATAATTTTGATGCTTTACAAATCGGGTTAGCATCTCCAGAACAAATTAGAGAGTGGTCTAGAGGAGAAGTAAAGAAACCTGAAACTATTAACTATAGAACGTTAAAACCTGAGAGAGACGGATTATTCTGTGAAAGAATATTCGGACCTATAAAAGACTGGGAATGTCACTGTGGAAAATACAAAAGAGTTAGATATAAAGGTATTGTATGTGACAGATGTGGTGTTGAAGTAACTAAATCTAAAGTTAGAAGAGAGAGAATGGCTCACATTGAATTAGCTGCGCCAGTATCTCATATATGGTATTTCAAAGGAATACCTTCAAGAATGGGATTAATCCTTGATATGTCACCAAGAGCTTTAGAAAAAGTTCTATATTTTGCATCATATATAGTTATAGATCCAAAAGAAACTTCATTATTAAAGAAACAACTTCTTAATGAGAAAGAATATAGAGAAGCGTGTGATAAATATGGTGAAGAGAGCTTTGTAGCTGGAATGGGTGCAGAAGCTATAAAAACTTTATTATCAGAAATAGACTTAGAAAGAACTGCTGCTGAACTTAAAGAAGAATTAAAGCAAAGCACAGGTCAAAAGAAAGTTAGAATAATAAGAAGATTAGAAGTTGTAGAATCATTCAAATCATCAGGAAATAAACCTGAATGGATGGTAGTAGATGTAATACCAGTTATACCACCTGATTTAAGACCTATGGTTCAATTAGATGGAGGTAGATTTGCTACTTCAGATTTAAATGATTTATATAGAAGAGTTATAAATAGAAATAACAGACTTAAGAAGTTATTAGACCTTGGCGCTCCTGACATAATAGTTAGAAACGAAAAGAGAATGCTTCAAGAGGCTGTAGATGCTTTAATAGATAACGGTAGAAGAGGAAGACCTGTAACTGGTCCTGGAAACAGACCTCTTAAATCATTATCAGATATGCTTAAAGGTAAGCAAGGAAGATTCAGACAAAACCTTCTTGGTAAGAGGGTTGACTATTCAGGAAGATCAGTTATCGTTGTTGGTCCTGAATTAAAAATGTATCAATGTGGTCTTCCAAAAGAAATGGCTTTAGAATTATTCAAGCCTTTCGTTATGAAGAAATTAGTTGAAGACGGAGTTGCTCATAACATAAAGAGTGCTAAGAGAATGGTTGAAAGAGTAATGCCACAAGTATGGGATGTACTTGAAGAAGTTATAGCAGACCATCCAGTATTACTAAACAGAGCACCTACTCTACATAGACTAGGTATTCAAGCATTCCAACCAGTATTAGTTGAAGGTAGAGCTATAAAACTTCATCCACTTGTATGTACAGCATATAACGCTGACTTCGATGGAGACCAAATGGCTGTTCACGTACCTTTATCAGTTGAAGCTCAAGCAGAAGCTAGATTCTTAATGCTTGCAGCAGGTAATATAATGAAACCTTCTGATGGTAGACCAGTTTGTGTACCTACTCAGGATATGGTTCTTGGTTCATATTACTTAACAATGGATAAAGACGGAGCTAAAGGTGAAGGAAAATACTTCGCATCATTTGATGAAGTAATAATGGCTTACCAATTAAAAGAAGTTGATATTCATGCTAAGATTAACGTTAAAGTTACTAAAGAAATAGATGGAGAGCTTAAGTCAGGAATAATCAAAACAACTCCAGGATTTATAATATTCAATGAATGTATACCTCAAGACCTAGGTTTTGTAAATAGAGAAAATCCTGAAGAAATG
PROTEIN sequence
Length: 583
LFELNNFDALQIGLASPEQIREWSRGEVKKPETINYRTLKPERDGLFCERIFGPIKDWECHCGKYKRVRYKGIVCDRCGVEVTKSKVRRERMAHIELAAPVSHIWYFKGIPSRMGLILDMSPRALEKVLYFASYIVIDPKETSLLKKQLLNEKEYREACDKYGEESFVAGMGAEAIKTLLSEIDLERTAAELKEELKQSTGQKKVRIIRRLEVVESFKSSGNKPEWMVVDVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKKLLDLGAPDIIVRNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPELKMYQCGLPKEMALELFKPFVMKKLVEDGVAHNIKSAKRMVERVMPQVWDVLEEVIADHPVLLNRAPTLHRLGIQAFQPVLVEGRAIKLHPLVCTAYNADFDGDQMAVHVPLSVEAQAEARFLMLAAGNIMKPSDGRPVCVPTQDMVLGSYYLTMDKDGAKGEGKYFASFDEVIMAYQLKEVDIHAKINVKVTKEIDGELKSGIIKTTPGFIIFNECIPQDLGFVNRENPEEM