ggKbase home page

NECEvent2014_8_1_scaffold_2690_1

Organism: NECEvent2014_8_1_Clostridium_perfringens-rel_30_12

near complete RP 47 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: 2..1156

Top 3 Functional Annotations

Value Algorithm Source
Triple helix repeat-containing collagen n=2 Tax=Clostridium perfringens RepID=H7CUU3_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 393.0
  • Bit_score: 826
  • Evalue 1.60e-236
  • rbh
Triple helix repeat-containing collagen {ECO:0000313|EMBL:EIA17527.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfrin similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 393.0
  • Bit_score: 826
  • Evalue 2.20e-236
triple helix repeat-containing collagen similarity KEGG
DB: KEGG
  • Identity: 97.5
  • Coverage: 393.0
  • Bit_score: 824
  • Evalue 9.80e-237

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1155
CCTAATAGATATTATGATGATTACAATAGATATAATTGTTACGATAGATATAATTGCTATGATGATGAGTATTGTCAAGATGATTATTATTGCAAGGAAGACTGTTATTGTAAAGATGATTGCTATTTAGAGATAAATTGCAATTGTTGCGATTGTTGTAAACCTGGACCAAGGGGTCCAAGAGGACCTCAAGGTCCTAGGGGTCCTCAAGGACCAAGAGGTCCTATGGGATGTCAAGGTGAGCGTGGTCCAATAGGTCCTATGGGCCCTATGGGACCTATTGGACCTCAAGGTCCACAAGGTGAACAAGGTCTTACTGGCCCTCAAGGCCCTGCAGGTCCTCAAGGCGAACAAGGTCCACAAGGTGATCAAGGTCCTGTTGGTCCTATAGGCCCTCAAGGTCCTCAGGGTGAGCAAGGTCTTACTGGTCCTCAAGGTCCTGCTGGTTCTCAAGGTCCTGAAGGTCCTACTGGCCCTCAAGGTGCTACTGGCCCTCAAGGTCCTGAAGGTCCTGTTGGTCCTCAAGGAGCTCAAGGTCCACAAGGCCCTCAAGGTCCTCAAGGTGCTACCGGTCCTACTGGCCCACAGGGTCCTCAAGGTAATCAAGGTCCTGCTGGTCCTCAAGGCCCTGTTGGTCCTCAAGGTCCTCAAGGTGAACCTGGAGTGGATTTTGATGATACCTTATTAGTTAGTTATTCCTCATTAACTTCTCAAAATGTTAATGCTAATGGTATATTCACTTATAATATCCAAAATCCTAATGGCTCAACTTTTACAGCAATAACTGCCAATATAGCAAACGGAACATTTACAATAAATGAACCTGGAAGATATTTATTTATGTGGTCATTTAATTTAGATAACACAAATAATACCACAGCTAGCGCTATAGTATCTTTATTTAGAAATGGTTCTAGAGTATTTTTATCTGGAACTCCTAGAGTAGCTCCTGGTGAAATAGGCGTAGTAAATGGAAGTATTGCCGTAAATGCTAATGCTGGTGATGTATTTGCTTTAGTTAATAATTCTACAAGAAACGTTTTATCACAAATAATATCTTCACCAATTTCTGTAACTCCAGCTATCTTAGGAGAATCTACAGGAATAAATTCAGGAATAGGATCTTGGGTTCAAATAGTTAGAGTATCTGATTAA
PROTEIN sequence
Length: 385
PNRYYDDYNRYNCYDRYNCYDDEYCQDDYYCKEDCYCKDDCYLEINCNCCDCCKPGPRGPRGPQGPRGPQGPRGPMGCQGERGPIGPMGPMGPIGPQGPQGEQGLTGPQGPAGPQGEQGPQGDQGPVGPIGPQGPQGEQGLTGPQGPAGSQGPEGPTGPQGATGPQGPEGPVGPQGAQGPQGPQGPQGATGPTGPQGPQGNQGPAGPQGPVGPQGPQGEPGVDFDDTLLVSYSSLTSQNVNANGIFTYNIQNPNGSTFTAITANIANGTFTINEPGRYLFMWSFNLDNTNNTTASAIVSLFRNGSRVFLSGTPRVAPGEIGVVNGSIAVNANAGDVFALVNNSTRNVLSQIISSPISVTPAILGESTGINSGIGSWVQIVRVSD*