ggKbase home page

NECEvent2014_8_1_scaffold_3208_4

Organism: NECEvent2014_8_1_Clostridium_perfringens-rel_30_12

near complete RP 47 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(1191..1454)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor n=4 Tax=Clostridium butyricum RepID=B1QYS1_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 87.0
  • Bit_score: 171
  • Evalue 3.70e-40
Sporulation sigma factor SigG {ECO:0000313|EMBL:KHD15563.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 87.0
  • Bit_score: 171
  • Evalue 5.10e-40
sigG; RNA polymerase sigma-G factor SigG similarity KEGG
DB: KEGG
  • Identity: 94.3
  • Coverage: 87.0
  • Bit_score: 166
  • Evalue 3.30e-39

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 264
GAGCCTATTTATCATGATGGTGGAGATGCAATATATGTAATGGATCAAATTAGTGACTCAAAAGATACGGATGAGAATTGGCTTGAAAACATTTCCATAAAAGAAGCTATGAAAAAGCTAAGCGATCGTGAAAAATTAATTTTAAATTTAAGATTTTTTAATGGAAGAACTCAAATGGAGGTAGCTGATGAAATTGGTATATCTCAAGCACAAGTTTCAAGGTTGGAAAAAATAGCATTAAAGCATATGAGGAAGTATGTATAG
PROTEIN sequence
Length: 88
EPIYHDGGDAIYVMDQISDSKDTDENWLENISIKEAMKKLSDREKLILNLRFFNGRTQMEVADEIGISQAQVSRLEKIALKHMRKYV*