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NECEvent2014_8_1_scaffold_4325_1

Organism: NECEvent2014_8_1_Clostridium_perfringens-rel_30_12

near complete RP 47 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 2
Location: comp(2..1063)

Top 3 Functional Annotations

Value Algorithm Source
Substrate-binding protein MsmE n=1 Tax=Clostridium perfringens (strain SM101 / Type A) RepID=Q0SUH9_CLOPS similarity UNIREF
DB: UNIREF100
  • Identity: 99.4
  • Coverage: 354.0
  • Bit_score: 735
  • Evalue 2.60e-209
  • rbh
ABC transporter periplasmic substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 99.2
  • Coverage: 354.0
  • Bit_score: 733
  • Evalue 2.10e-209
Substrate-binding protein MsmE {ECO:0000313|EMBL:ABG85641.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (str similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 354.0
  • Bit_score: 733
  • Evalue 1.00e-208

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1062
GTGAAGAAATTTTATGGTTTTGTTTTACTAATATTTTGTTTTAATCTTTTTGGATGTTCTTTTAGAAATACAGAAGTATCAAATAAAAATATTCAAGGATATGACAAAGGCGAGGAGCTTATAACAATGTGGGTTCATGTTATAGAAGAAACTTCAGAAGGACAAGCTTATAAAAATTCAGTAGAAAGGTTTAATAAAGAATACAATGGTAAGTATTGTTTAAGTGTTGAATTTGTACCTCGTAATGAAAGTGGAGGAGGATATACTGATAAAATAAATTCATCAGTAATTTCTGGAGGACTTCCAGACATAATAACTGTTGATGGGCCCAATGTATCAGCTTATGTTGCAAACAACATAATTCAGCCTTTAGTAGGTATAACTGATGATGAAAAGGCTAAATATTTACCGTCAGTAATAGAGCAAGGAACAATAAACAATAAATTATATGCATTAGGTCTAATGGAATCTAGTACGTTATTTTATTATAACAAAGATATATTAAACGAAGTAGGAATACAAGTACCATCATTTGATAATCCATGGACTTGGGACGAATTAAATAAGGTCTGTGAAAAAGTTAAGAACTATTTAGATGAAAAAAATGGATATCCAATAGATATGTCATTCCCAGCAGGGGAAACAACTATTTATTTTTATGCACCATTTATATGGTCAAATGGTGGAGATTTTGTAAGCTCTGATGGTTTAAAGGTTAATGGAGTATTTAATTCTGAAAAGAATGTAGAAACTATTAGTTATTTTAAAGAAATTACAGACAAAGGATATATACCTAAATATACAATAAGTGATTTATTTGAAAAGGGAAGAGCTGCATTTAAATTTGATGGAGCATGGGCTATTACAAATATAAGAAATAACTATCCAGATTTTAATTTAGGAATAGCACCATATCCAGTGGGAAATGATTGGAATGGAGAAAAGTATACACCAACAGGAGGATGGGCTTTTGCAACAACTACAACTTGTAAAAACCCTGAGGCTGCAAAAGAAGCAATCAAGTTTTTAACTAATGCAGAAAGTGGCATAGATATGTATAAC
PROTEIN sequence
Length: 354
VKKFYGFVLLIFCFNLFGCSFRNTEVSNKNIQGYDKGEELITMWVHVIEETSEGQAYKNSVERFNKEYNGKYCLSVEFVPRNESGGGYTDKINSSVISGGLPDIITVDGPNVSAYVANNIIQPLVGITDDEKAKYLPSVIEQGTINNKLYALGLMESSTLFYYNKDILNEVGIQVPSFDNPWTWDELNKVCEKVKNYLDEKNGYPIDMSFPAGETTIYFYAPFIWSNGGDFVSSDGLKVNGVFNSEKNVETISYFKEITDKGYIPKYTISDLFEKGRAAFKFDGAWAITNIRNNYPDFNLGIAPYPVGNDWNGEKYTPTGGWAFATTTTCKNPEAAKEAIKFLTNAESGIDMYN