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NECEvent2014_8_1_scaffold_80_15

Organism: NECEvent2014_8_1_Klebsiella_pneumoniae-rel_58_13_partial

partial RP 26 / 55 MC: 3 BSCG 25 / 51 ASCG 11 / 38 MC: 2
Location: comp(13721..14296)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide export system protein LptC n=8 Tax=Klebsiella RepID=B5XSU2_KLEP3 similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 383
  • Evalue 1.70e-103
  • rbh
lipopolysaccharide transporter similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 383
  • Evalue 4.90e-104
Lipopolysaccharide export system protein LptC {ECO:0000256|HAMAP-Rule:MF_01915, ECO:0000256|PIRNR:PIRNR028513}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 191.0
  • Bit_score: 383
  • Evalue 2.40e-103

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Taxonomy

Klebsiella pneumoniae → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 576
ATGAGTAAAACCAGACGTTGGGTTATCATTTTACTGTCGCTGCTCGCGCTGATCCTCATCGGCCTGAATCTGGCGAATACGGACGACACGGCCCAGCCGGAGGTCAATCCCAACGACCCGACGTATAAAAGCGAACATACCGACACCGTCGTGTACAGCCCGGAAGGCGCCCTGAGCTATCGGCTGATTGCCGAGCATGTGGAATACTTTTCCGATCAGGAGGTTTCTTGGTTTACCAAGCCGGTGATGACCACCTTTGATACCAATAAGGTGCCAACCTGGTCAATCAGGGCAGATAAAGCGAAGCTGACGAATGACCGTATGCTCTATCTTTACGGGCACGTTGAGGTGAATGCGCTCGCGCCTGACTCTCAACTGCGCAAAATTACGACGGATAACGCCCAGATAAATCTGGTCACACAGGACGTTACCTCCGATGACATGGTGACGTTATACGGCACCACATTTAATTCCAGCGGCCTGAAAATGCGTGGAAACCTTCGCAGCAAAAATGCCGAGCTGATTGAAAAGGTGAGAACCTCTTATGAAATTCAGAACAAACAAACTCAGCCTTAA
PROTEIN sequence
Length: 192
MSKTRRWVIILLSLLALILIGLNLANTDDTAQPEVNPNDPTYKSEHTDTVVYSPEGALSYRLIAEHVEYFSDQEVSWFTKPVMTTFDTNKVPTWSIRADKAKLTNDRMLYLYGHVEVNALAPDSQLRKITTDNAQINLVTQDVTSDDMVTLYGTTFNSSGLKMRGNLRSKNAELIEKVRTSYEIQNKQTQP*