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NECEvent2014_8_1_Klebsiella_pneumoniae-rel_58_13_partial

NECEvent2014_8_1_Klebsiella_57_14
In projects: NECEvent2014_8_1

Consensus taxonomy: Klebsiella  →  Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: NECEvent2014_8_1_UNK

Properties

Avg. coverage: 13.71 Longest contig: 30.04 Kbp Bin length: 5.42 Mbp GC content: 57.19 %
Contigs count: 1156 Features count: 5965 rRNAs count: 0 tRNAs count: 68

Genome completeness

partial RP 26 / 55 MC: 3 BSCG 25 / 51 ASCG 11 / 38 MC: 2
Displaying items 951-1000 of 1156 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_1_scaffold_2990 178_001_scaffold_2990
Species: Raoultella planticola (50%)
2 1572 bp 52.74 4.39 99.81
NECEvent2014_8_1_scaffold_4015 178_001_scaffold_4015
Species: Klebsiella pneumoniae (50%)
2 1157 bp 62.92 3.63 100.09
NECEvent2014_8_1_scaffold_1968 178_001_scaffold_1968
Species: Klebsiella variicola CAG:634 (50%)
2 2425 bp 59.42 11.88 92.54
NECEvent2014_8_1_scaffold_1971 178_001_scaffold_1971
Species: Klebsiella pneumoniae (50%)
2 2420 bp 59.88 6.32 85.66
NECEvent2014_8_1_scaffold_2227 178_001_scaffold_2227
Species: Klebsiella pneumoniae (50%)
2 2125 bp 62.49 9.46 99.39
NECEvent2014_8_1_scaffold_2996 178_001_scaffold_2996
Species: Klebsiella pneumoniae (100%)
2 1569 bp 58.83 6.02 95.41
NECEvent2014_8_1_scaffold_3510 178_001_scaffold_3510
Species: Klebsiella pneumoniae (100%)
2 1329 bp 56.88 4.51 100.00
NECEvent2014_8_1_scaffold_4022 178_001_scaffold_4022
Species: Klebsiella pneumoniae (50%)
2 1155 bp 51.69 6.75 76.10
NECEvent2014_8_1_scaffold_1975 178_001_scaffold_1975
Species: Klebsiella pneumoniae (100%)
2 2417 bp 58.05 10.05 89.99
NECEvent2014_8_1_scaffold_3512 178_001_scaffold_3512
Species: Klebsiella pneumoniae (50%)
2 1328 bp 65.51 5.20 100.30
NECEvent2014_8_1_scaffold_3257 178_001_scaffold_3257
Species: Klebsiella pneumoniae (100%)
2 1439 bp 65.39 8.13 100.49
NECEvent2014_8_1_scaffold_3513 178_001_scaffold_3513
Species: Klebsiella pneumoniae (100%)
2 1328 bp 64.61 7.00 98.27
NECEvent2014_8_1_scaffold_4282 178_001_scaffold_4282
Species: Klebsiella variicola CAG:634 (50%)
2 1083 bp 63.53 8.86 100.55
NECEvent2014_8_1_scaffold_2748 178_001_scaffold_2748
Species: Klebsiella pneumoniae (100%)
2 1717 bp 39.66 4.02 61.50
NECEvent2014_8_1_scaffold_1981 178_001_scaffold_1981
Species: Klebsiella variicola (50%)
2 2410 bp 59.50 8.59 81.41
NECEvent2014_8_1_scaffold_2237 178_001_scaffold_2237
Species: Klebsiella pneumoniae (50%)
2 2111 bp 54.57 10.30 84.84
NECEvent2014_8_1_scaffold_3261 178_001_scaffold_3261
Species: Klebsiella pneumoniae (100%)
2 1437 bp 44.95 7.72 38.00
NECEvent2014_8_1_scaffold_3773 178_001_scaffold_3773
Species: Klebsiella pneumoniae (50%)
2 1231 bp 54.51 4.87 100.16
NECEvent2014_8_1_scaffold_1471 178_001_scaffold_1471
Species: Klebsiella quasipneumoniae (50%)
2 3256 bp 53.65 12.02 83.66
NECEvent2014_8_1_scaffold_2239 178_001_scaffold_2239
Species: Klebsiella pneumoniae (100%)
2 2109 bp 63.96 10.38 97.01
NECEvent2014_8_1_scaffold_4543 178_001_scaffold_4543
Species: Klebsiella variicola (50%)
2 1018 bp 57.66 9.87 95.19
NECEvent2014_8_1_scaffold_2752 178_001_scaffold_2752
Species: Klebsiella pneumoniae (100%)
2 1715 bp 55.10 4.55 95.34
NECEvent2014_8_1_scaffold_2497 178_001_scaffold_2497
Species: Klebsiella pneumoniae (100%)
2 1889 bp 53.73 5.08 82.27
NECEvent2014_8_1_scaffold_3265 178_001_scaffold_3265
Species: Klebsiella variicola (100%)
2 1435 bp 65.51 5.54 99.93
NECEvent2014_8_1_scaffold_3777 178_001_scaffold_3777
Species: Klebsiella pneumoniae (50%)
2 1229 bp 62.00 6.47 73.96
NECEvent2014_8_1_scaffold_3523 178_001_scaffold_3523
Species: Klebsiella pneumoniae (50%)
2 1324 bp 57.25 6.46 83.16
NECEvent2014_8_1_scaffold_4035 178_001_scaffold_4035
Species: Klebsiella pneumoniae (100%)
2 1151 bp 67.51 7.69 60.99
NECEvent2014_8_1_scaffold_4036 178_001_scaffold_4036
Species: Enterobacter cloacae (100%)
2 1151 bp 59.69 7.04 99.83
NECEvent2014_8_1_scaffold_2245 178_001_scaffold_2245
Species: Klebsiella variicola (50%)
2 2100 bp 61.95 5.00 89.86
NECEvent2014_8_1_scaffold_3013 178_001_scaffold_3013
Species: Klebsiella pneumoniae (100%)
2 1555 bp 64.63 5.88 100.71
NECEvent2014_8_1_scaffold_3525 178_001_scaffold_3525
Species: Klebsiella variicola (50%)
2 1323 bp 53.59 10.43 67.12
NECEvent2014_8_1_scaffold_4549 178_001_scaffold_4549
Species: Klebsiella pneumoniae (100%)
2 1017 bp 52.70 2.36 100.00
NECEvent2014_8_1_scaffold_4038 178_001_scaffold_4038
Species: Klebsiella variicola (50%)
2 1150 bp 60.00 6.52 100.44
NECEvent2014_8_1_scaffold_1991 178_001_scaffold_1991
Species: Klebsiella variicola (100%)
2 2389 bp 58.85 7.16 97.95
NECEvent2014_8_1_scaffold_2506 178_001_scaffold_2506
Species: Klebsiella variicola CAG:634 (50%)
2 1882 bp 62.81 8.05 81.62
NECEvent2014_8_1_scaffold_1740 178_001_scaffold_1740
Species: Klebsiella pneumoniae (50%)
2 2724 bp 56.20 8.59 62.33
NECEvent2014_8_1_scaffold_3276 178_001_scaffold_3276
Species: Klebsiella variicola (50%)
2 1430 bp 61.89 5.77 102.38
NECEvent2014_8_1_scaffold_2253 178_001_scaffold_2253
Species: Klebsiella pneumoniae (50%)
2 2094 bp 44.27 5.01 72.78
NECEvent2014_8_1_scaffold_4557 178_001_scaffold_4557
Species: Klebsiella variicola (100%)
2 1014 bp 54.64 8.43 64.50
NECEvent2014_8_1_scaffold_1742 178_001_scaffold_1742
Species: Klebsiella pneumoniae (100%)
2 2723 bp 48.04 3.64 99.82
NECEvent2014_8_1_scaffold_2510 178_001_scaffold_2510
Species: Klebsiella variicola (50%)
2 1878 bp 56.66 7.51 97.76
NECEvent2014_8_1_scaffold_1999 178_001_scaffold_1999
Species: Klebsiella pneumoniae (100%)
2 2378 bp 59.25 7.38 92.98
NECEvent2014_8_1_scaffold_3535 178_001_scaffold_3535
Species: Escherichia coli (100%)
2 1318 bp 34.67 5.92 92.64
NECEvent2014_8_1_scaffold_2002 178_001_scaffold_2002
Species: Escherichia coli (50%)
2 2376 bp 47.98 6.38 58.84
NECEvent2014_8_1_scaffold_2772 178_001_scaffold_2772
Species: Enterobacter aerogenes (50%)
2 1706 bp 62.43 5.19 84.76
NECEvent2014_8_1_scaffold_3029 178_001_scaffold_3029
Species: Klebsiella pneumoniae (100%)
2 1544 bp 54.15 10.59 82.38
NECEvent2014_8_1_scaffold_3285 178_001_scaffold_3285
Species: Klebsiella pneumoniae (100%)
2 1427 bp 57.74 6.83 102.59
NECEvent2014_8_1_scaffold_4309 178_001_scaffold_4309
Species: Escherichia coli (50%)
2 1076 bp 48.14 6.41 76.12
NECEvent2014_8_1_scaffold_4054 178_001_scaffold_4054
Species: Klebsiella variicola (50%)
2 1145 bp 52.23 5.76 72.58
NECEvent2014_8_1_scaffold_2775 178_001_scaffold_2775
Species: Escherichia coli (50%)
2 1704 bp 54.75 111.62 95.25
Displaying items 951-1000 of 1156 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.