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NECEvent2014_8_2_scaffold_119_28

Organism: NECEvent2014_8_2_Clostridium_paraputrificum_30_98

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 3
Location: 20449..21129

Top 3 Functional Annotations

Value Algorithm Source
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1444289 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu similarity UNIPROT
DB: UniProtKB
  • Identity: 66.1
  • Coverage: 224.0
  • Bit_score: 309
  • Evalue 5.30e-81
rluF; Ribosomal large subunit pseudouridine synthase F (EC:5.4.99.21) similarity KEGG
DB: KEGG
  • Identity: 64.1
  • Coverage: 220.0
  • Bit_score: 302
  • Evalue 1.00e-79
Pseudouridine synthase n=1 Tax=Clostridium chauvoei JF4335 RepID=S6F7U7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 62.7
  • Coverage: 225.0
  • Bit_score: 299
  • Evalue 2.30e-78

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Taxonomy

Clostridium novyi → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 681
ATGAGAATTAATAAGTTATTAAGCAATTATGGATACTGTTCTAGGAAGGAAGCTAATAAGCTTATTCAAGATAAAAGGGTTATAGTGAATGGAGAACTAGCAATTGAGGGGCAATGGGTTGAAGAAACTGATACTATACTTTTAGATAATGTAAGAGTAAAACCTAAGGATAAGGTATATGTTGCTTTTAATAAACCAGTAGGAATTGTTTGTACAGCAGCAAAGGAAACTGAAAATAATATTATAGATTACATTGATTATCCTGAATATATTTTTCCAATTGGAAGGTTAGATAAACCTTCTCAGGGATTGATTTTGTTAACAAATGATGGAGAGTTAGCTGATAAAATATTAAGCGCTGAAAACTATCATGAGAAGGAGTATATAGTTGAAGTAGATAAAGATATAGATGATGAATTTATTTTAAATATGTCCAATGGAATTAAAATAGGGGATAGGATAACTAGGAAATGCCAAGTTAAAGCTTTAGGTGAAAAGAAGTTTTCTATTATATTAACAGAAGGCATGAATAGGCAAATAAGAAAGATGTGTAAGTCTTTAGGATATGAAGTTACATTTTTAAAGAGAATTAGAATTATGAATGTTTTAATTGACGGAATAGAAGAAGGAAAGTGGAGAAATCTGAGTATTAAGGAAATAAATACTTTAAAAAATGGATAA
PROTEIN sequence
Length: 227
MRINKLLSNYGYCSRKEANKLIQDKRVIVNGELAIEGQWVEETDTILLDNVRVKPKDKVYVAFNKPVGIVCTAAKETENNIIDYIDYPEYIFPIGRLDKPSQGLILLTNDGELADKILSAENYHEKEYIVEVDKDIDDEFILNMSNGIKIGDRITRKCQVKALGEKKFSIILTEGMNRQIRKMCKSLGYEVTFLKRIRIMNVLIDGIEEGKWRNLSIKEINTLKNG*