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NECEvent2014_8_2_scaffold_171_19

Organism: NECEvent2014_8_2_Clostridium_paraputrificum_30_98

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 3
Location: comp(22647..24029)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H6T4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 63.4
  • Coverage: 462.0
  • Bit_score: 591
  • Evalue 5.90e-166
  • rbh
rpoN; RNA polymerase sigma-54 factor similarity KEGG
DB: KEGG
  • Identity: 66.0
  • Coverage: 462.0
  • Bit_score: 610
  • Evalue 3.50e-172
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:AIY84149.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Su similarity UNIPROT
DB: UniProtKB
  • Identity: 66.0
  • Coverage: 462.0
  • Bit_score: 610
  • Evalue 1.70e-171

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Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1383
ATGAAAATGGATTATAGCTATAATCTTACCCAGGAACAAAAGTTAGTATTAACTCATGAAATGCAGTTATCTATTAAAGTGTTACAAATGTCTGCAAATGAGTTGAAAGAGTACATAAATGATGAATTTGCTGAAAATCCTATATTAGAGATACAAGAAAATATAAGTAATTCAGCTGATAGTAAAAATAAAGAATTAGATAAATACGATTATAAAGAAATGATAAAATATCTTGAGTTTGACAATTATGGGGCTCAAAGTTATGGAAGTTATGATGAGGAGGAAATATCGCCTTTTAATTTTATTTCAGAAAAAAAATCATTAAAAGAATACCTTTATGAGCAAATTAATGAGATTGAGGAAAACGATTTAATAATAAGTATAGCAGGTTATATTGTTGAAAGTTTAGACAATAGAGGATATCTTGAAATAAGCATAGAGGAAATAGCAAAGGAAATTAACATTGATAAGGCTTTAGTTGAAGAAGCTTTAGAGGTGGTTCAAGATTTAGAGCCTTACGGAATAGGAGCTAGAAATTTAAAAGAATGTTTAAAGATACAACTTATAAATTTGGGATTAATAGATGATATATTAGAGAAAATAGTAGATGATCATCTAGAAGACATAGCTAATAGTAAGTATGGAAACATAGCTAAGTCATTAAATATTTCTCCTAGAGAGGCTCAAAGATATGGTGATATTATAAGGAAGCTTGAACCGAAACCTTCAAGAGGATTTTTTACAGGAGATGATGTGAAATTTATAATTCCTGATGCTGAAATAAGAAATATTCAAGGTGAGTTTTATATAATTATGAATGATGGAATTCTACCAAAACTATCAGTAAATAATGCTTATAAAGAAGTTTTAAATACTAATACAGATGATGGAACTACTGAATATGTAAAAGAAAAGTTAAATAAAGCCATATCTATAGTAAAAAGTATAGAGCAGAGAAGATCAACTTTATATAAAGTACTTGAAAAGATAGTAGAAAAACAAAAAGATTTTCTATTAAAGGGAGTTAACTCTATAAAACCAATGACTTTAAAAGAGATTTCGGAAGATATAAAAATGCATGAATCAACAGTAAGCAGAGCTATAAAAGATAAATATATATTAACTAGCTTTGGAACAATAAAAATTAAAGATTTATTTGTATCTAAGTTATCTGTTGGAAAAAATGATGAAGATGTTGCTGTTACAATAATAAAGAAAAAAATAAAAAACATGATAGATAAAGAGAATAAAAAGAAACCACTATCAGATCAAGTTATTTGCGATAATTTAAATAGTGAAAAGATAAATATATCTAGAAGGACAGTAGCTAAATATAGAGAGGAATTAGGAATACAATCCTCAAGTAAAAGAAAAAGAATTTAA
PROTEIN sequence
Length: 461
MKMDYSYNLTQEQKLVLTHEMQLSIKVLQMSANELKEYINDEFAENPILEIQENISNSADSKNKELDKYDYKEMIKYLEFDNYGAQSYGSYDEEEISPFNFISEKKSLKEYLYEQINEIEENDLIISIAGYIVESLDNRGYLEISIEEIAKEINIDKALVEEALEVVQDLEPYGIGARNLKECLKIQLINLGLIDDILEKIVDDHLEDIANSKYGNIAKSLNISPREAQRYGDIIRKLEPKPSRGFFTGDDVKFIIPDAEIRNIQGEFYIIMNDGILPKLSVNNAYKEVLNTNTDDGTTEYVKEKLNKAISIVKSIEQRRSTLYKVLEKIVEKQKDFLLKGVNSIKPMTLKEISEDIKMHESTVSRAIKDKYILTSFGTIKIKDLFVSKLSVGKNDEDVAVTIIKKKIKNMIDKENKKKPLSDQVICDNLNSEKINISRRTVAKYREELGIQSSSKRKRI*