ggKbase home page

NECEvent2014_8_2_scaffold_171_24

Organism: NECEvent2014_8_2_Clostridium_paraputrificum_30_98

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 3
Location: comp(27537..28976)

Top 3 Functional Annotations

Value Algorithm Source
Vancomycin B-type resistance protein VanW n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2UY29_CLOBA similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 474.0
  • Bit_score: 412
  • Evalue 6.70e-112
putative peptidoglycan binding domain protein similarity KEGG
DB: KEGG
  • Identity: 47.0
  • Coverage: 451.0
  • Bit_score: 414
  • Evalue 5.00e-113
Putative peptidoglycan binding domain protein {ECO:0000313|EMBL:AIY83741.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 47.0
  • Coverage: 451.0
  • Bit_score: 414
  • Evalue 2.50e-112

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium baratii → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1440
ATGAAGGATAAAAAAGATATTATTAAAGTTTTAAAGTCAAAATATTTTATTATTTCGGGAATTATAGTTTTAATAATTGGTGCTTATTTAGCTTATACAGCATCGTTAAGTAAGCAGGTAAAGGCTTGGGATAACAAAACATATCCGGGAGTGACTGTTAAGGGAGTAGACCTTGGCGGAAAGACAAAAGAAGAGGTGGCACAAATTCTTAATGAAAAGTTTTCATCACAGTTAAGCGAAAAGGCAATTAATATAACTGTTGAGAACAAGAAACTTTCATACAAGTATGGTGACTTAAATGCTAAGTATAATATAGATGAAGTGGCAGAAGAGGCAGTCTTATACGGTAAAGATACAAGTGCATATAATAAAAATAAACTAATAAAGAATAAAAGTAAAGAGACTCATGAAATACAAATGAGCTTAGTTTATGATGAAACACAAATAGGAAATATCGAGAAAGATATAAAGAAAGCTGTAGATATATCACCAGTTAATGCAACAATTTCTAAATCGGGAGATAGTTTTAATATTTCTAGTGATAAAGTTGGGTATACTCTTGATTCAACGGATTTAGATGCAAAGATGAAAGAAGCATTAAATGGAAATTTAGGTGAATCTACTGATTTAACATTTAACTTAAAAGAAGTACAAGCTAAAGTTAAAAAATCAGATTTAGCTAAGATTAATGGGAAAATGTCAACATTTTCTACTCAATACAAGTCATCTACAGAAGATAGAAGCTATAACATAGAGTTTGTAACATCATTATTAAATGGTACTGTACTTATGCCAGGTGAAGAATTTAGTTATGGTGAACTATCACAAAGAGGTAAAGGTAAGTATAAAATAGGTACTATGTATGTAAATAATAAGGTTGTTCCTGCAGAGGCTGGTGGAGTGTGTCAAGTATCAAGTACATTATATAATGCAGCTATGCAAGCTAATATAAGATCTACTGAGAGAAGGAATCATTCATTACCAGTTGGATATGTAGCTCCAGGTTTAGATGCAACAATGGCTTGGGGAGGAGTAGACTATAAGTTTAAGAACCCATACGATTTCCCAATTTATATTGAAGGATATACACAAAATAAGGTTGTGACTATAAATATATATGGAAGGCCAAGTGCTCTTGATGGGAAAACTTATAAACTAGTCAGCGAAGATTTAGGAACTATACCTCAAACAATTAAGTATAAGGATGATGCAAGTTTACCTAAGGGCACAGAAGTTGTAGAGGTAAAAGGTGCAGCAGGGCGTAAAGCAAGAGCTTATTTAGTTACTTATAAGGATGGAAAACAAATTAATAAGGAACTAATATCTACAGATACTTATGCACCACAACAAACAGTTATTAGAAGGGGGACAGGCCCTGTAGCTGAACCAAATACACCTGAATCAACAGATAAAGAAGCTACAGGAACACCAACAGCATAA
PROTEIN sequence
Length: 480
MKDKKDIIKVLKSKYFIISGIIVLIIGAYLAYTASLSKQVKAWDNKTYPGVTVKGVDLGGKTKEEVAQILNEKFSSQLSEKAINITVENKKLSYKYGDLNAKYNIDEVAEEAVLYGKDTSAYNKNKLIKNKSKETHEIQMSLVYDETQIGNIEKDIKKAVDISPVNATISKSGDSFNISSDKVGYTLDSTDLDAKMKEALNGNLGESTDLTFNLKEVQAKVKKSDLAKINGKMSTFSTQYKSSTEDRSYNIEFVTSLLNGTVLMPGEEFSYGELSQRGKGKYKIGTMYVNNKVVPAEAGGVCQVSSTLYNAAMQANIRSTERRNHSLPVGYVAPGLDATMAWGGVDYKFKNPYDFPIYIEGYTQNKVVTINIYGRPSALDGKTYKLVSEDLGTIPQTIKYKDDASLPKGTEVVEVKGAAGRKARAYLVTYKDGKQINKELISTDTYAPQQTVIRRGTGPVAEPNTPESTDKEATGTPTA*