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NECEvent2014_8_2_scaffold_435_11

Organism: NECEvent2014_8_2_Clostridium_paraputrificum_30_98

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 3
Location: 11986..13467

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory protein VirD4 n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CRD0_THEYO similarity UNIREF
DB: UNIREF100
  • Identity: 40.5
  • Coverage: 417.0
  • Bit_score: 291
  • Evalue 1.40e-75
Type IV secretory protein VirD4 {ECO:0000313|EMBL:ERM92523.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal similarity UNIPROT
DB: UniProtKB
  • Identity: 40.5
  • Coverage: 417.0
  • Bit_score: 291
  • Evalue 1.90e-75
type IV secretory pathway VirD4 components-like protein similarity KEGG
DB: KEGG
  • Identity: 38.3
  • Coverage: 465.0
  • Bit_score: 290
  • Evalue 1.10e-75

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Taxonomy

Caldanaerobacter subterraneus → Caldanaerobacter → Thermoanaerobacterales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1482
TTGAGTGGATTATTGGAAATAATTATAGTTTTAATTATTGGAGGAGTTATTTATCAAATGTTCTTTGCTACGAAGGATTTGAAAAAATATAATCCTAATGAAAATGTAGTTCCAGAATATGATAAAGATAATTACATAATTCCACCAAAGGAAAAGGATAGTTATACACCAGAAGCTCCAAGGGGAGTTAAAACACCTTTTGCTGAAGTTCCTATAACTGTTGATGAAGAACAAGAGGAATTTAAAAGAAATAATATTTTATTAGGACAAGATATAAAAGGGTTTAATGATTTTTATGTTTCTCCAAAAGAGTTAAATGCTATGTGTTTAATTGTAGGAGCAACCGGAGCTGGTAAAACAGAGTGTATAAAAACATTATTAGAACATGCCTTAACAAATAATCATCCGATTATTATTGTTGATGGAAAAGGTGATCCAAAGTTTCCGAATGAATATAAGGAAATGTGTGATAGAAATAATAGGAACTTTAAATTGTTCTGTTGTGAAGCTGATAAGTCATTGCATTATAATCCATTAAGGCATGGTCAGTATACTGAATTAAAGGATAAGTTAATAGATATTTTTGAATGGTCAGAAGAATATTACAAAAATCAAGCTGAAAGATTTTTACAAGGAGTATTTAGAGTTTTGTTACTTCCTGAAGCTAAAGAGCTATTAGGTTATGAAGTAATTGATTTACAAATTTTAATTAAAACCTTCAGTATTGAAGTTATGGAAAATTTAGTACCTCAACTTGATGGTGCAGCTAATTTTATGTTACCAATTTTATCTGAAGCTGATGTTAAAGCAGTTAATGGATATGCAGGTAGATTAAAGACTATAGCAGAAAGTGAATTAGGGGAATTATTTATTGATACACAAGACCCAAATGTAATTGACTTGATGGAAAGTATTGAAAATAATGATGTGGTTTTCTTCTCATTGGATAGCTTAAAGTATTCTGTTTACGCTCAAATGTTGGGGAGATTAATAATTGCAGATTTAAAGACTGTTGCTCCAAGGTTTGCCGGAGAGGATAAGCAAATCTATACTGTTTTTGATGAATTTAATGTATTTGCTAGTGAAATAATAGTTAATTTAATTAATAAGACTAGGTCATATGGATTTAGAAATATTATGGGCACACAAGAGTTAGCAGATATGATTATAAATGGAGATGAAAAGTTATTACGCCAGGTGTGGGGAAATACAAATGTCAAAATAGCATTAAGGCAAGATGTTTCAGCATCCCAAGAGGAACTATCAAAAGGTGTAGGAACACAAGATTTATATAAAACAACAATTACTAAGGGTAAATCTGGAGAAAAGCAACAAATGAGTGATAGTTTGAGTGCAACCATTGAAGAAGAGCTTTACTATAAAGCTAGAGATTTTGGCGAACTTAAAATAGGTGAAGCTATAGTATTTATTAAAGTACCAGAGTTTAGACACGCAAGAATAAAAATTAGGATGGTGAAGTAA
PROTEIN sequence
Length: 494
LSGLLEIIIVLIIGGVIYQMFFATKDLKKYNPNENVVPEYDKDNYIIPPKEKDSYTPEAPRGVKTPFAEVPITVDEEQEEFKRNNILLGQDIKGFNDFYVSPKELNAMCLIVGATGAGKTECIKTLLEHALTNNHPIIIVDGKGDPKFPNEYKEMCDRNNRNFKLFCCEADKSLHYNPLRHGQYTELKDKLIDIFEWSEEYYKNQAERFLQGVFRVLLLPEAKELLGYEVIDLQILIKTFSIEVMENLVPQLDGAANFMLPILSEADVKAVNGYAGRLKTIAESELGELFIDTQDPNVIDLMESIENNDVVFFSLDSLKYSVYAQMLGRLIIADLKTVAPRFAGEDKQIYTVFDEFNVFASEIIVNLINKTRSYGFRNIMGTQELADMIINGDEKLLRQVWGNTNVKIALRQDVSASQEELSKGVGTQDLYKTTITKGKSGEKQQMSDSLSATIEEELYYKARDFGELKIGEAIVFIKVPEFRHARIKIRMVK*