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NECEvent2014_8_2_scaffold_538_8

Organism: NECEvent2014_8_2_Clostridium_paraputrificum_30_98

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 3
Location: comp(4380..4739)

Top 3 Functional Annotations

Value Algorithm Source
Single-stranded DNA-binding protein n=2 Tax=environmental samples RepID=R6FRM9_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 79.8
  • Coverage: 119.0
  • Bit_score: 200
  • Evalue 7.70e-49
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262787 species="Bacteria; Firmicutes; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 79.8
  • Coverage: 119.0
  • Bit_score: 200
  • Evalue 1.10e-48
ssb; single-stranded DNA-binding family protein similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 112.0
  • Bit_score: 183
  • Evalue 3.60e-44

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Taxonomy

Clostridium sp. CAG:265 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 360
ATGAATAAAATAGTATTATTAGGGAGACTTATAAGAGATCCTGAACTAAGAGAATTAGAAAACGGAGATAAGTCATTTACAAAATTCATTATAGCAGTAGATAGAAATTTTAAGTCTGCTGACGGCACAAGAAAAGCTGATTTGATTCCAGTTACAGTATGGGGAAAAAAGGCTGAGGTTATATGTAAGTATATGAAAAAGGGAAGTTATATTAGCCTAAGTGGAAGATTAAGAACTGGTAGTTATGAGGATAGAGACGGTAATAAGAAGTACCTTGCTGAGGTAGTAGCAGAAGATTTTAAATTTGTTGGGGGTAGGCGTACAGAAGAAAATAATATGGATCATGCCACAGGAGAATAA
PROTEIN sequence
Length: 120
MNKIVLLGRLIRDPELRELENGDKSFTKFIIAVDRNFKSADGTRKADLIPVTVWGKKAEVICKYMKKGSYISLSGRLRTGSYEDRDGNKKYLAEVVAEDFKFVGGRRTEENNMDHATGE*