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NECEvent2014_8_2_scaffold_1862_6

Organism: NECEvent2014_8_2_Clostridium_paraputrificum_30_98

near complete RP 49 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 3
Location: comp(2370..2807)

Top 3 Functional Annotations

Value Algorithm Source
Possible sigma factor n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UYC1_CLOBO similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 137.0
  • Bit_score: 128
  • Evalue 7.70e-27
Possible sigma factor {ECO:0000313|EMBL:EES51083.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E similarity UNIPROT
DB: UniProtKB
  • Identity: 45.3
  • Coverage: 137.0
  • Bit_score: 128
  • Evalue 1.10e-26
DNA-directed RNA polymerase specialized sigma subunit similarity KEGG
DB: KEGG
  • Identity: 45.3
  • Coverage: 137.0
  • Bit_score: 111
  • Evalue 2.10e-22

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 438
ATGAGTACAAATGATAAATTTAAAAGAGTAGAAGCAATGCTTTATAACTATAAAAACACAGTTGCTGAAATAAAAATATTAAAAAGAGATTTAGAAATATTAGAAAATGATTATAGAGGAACTGGAGCTATAGGATATGAAGAGAAGACAGGTTCAACTAATAAATTTAATTCTGATGTAGAGAATGAAGTTATTAAGAGAGCAGAGAAGATCCAAAGAATTAAAAATAAGATTAGATTAAAAGAAATAGAAGTTGCTAATATAGGTGATGCTTATGAATCATTATTAGAAGATGAACAGCTATTAATTAGAGAAAGATACTTTAATAAAAAAGCAAATAAATATATTGCTAGTATATTTAGTGTCACTGAGCAAACATCATGTGATTATAAGAATAAGGTAATTAATAAATTAATACCATTATTAATAAGTGATTAA
PROTEIN sequence
Length: 146
MSTNDKFKRVEAMLYNYKNTVAEIKILKRDLEILENDYRGTGAIGYEEKTGSTNKFNSDVENEVIKRAEKIQRIKNKIRLKEIEVANIGDAYESLLEDEQLLIRERYFNKKANKYIASIFSVTEQTSCDYKNKVINKLIPLLISD*