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NECEvent2014_8_2_scaffold_62_40

Organism: NECEvent2014_8_2_Klebsiella_pneumoniae-rel_57_230_partial

partial RP 23 / 55 MC: 5 BSCG 23 / 51 ASCG 12 / 38 MC: 1
Location: 46542..47846

Top 3 Functional Annotations

Value Algorithm Source
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD {ECO:0000256|HAMAP-Rule:MF_01010}; EC=2.1.1.190 {ECO:0000256|HAMAP-Rule:MF_01010};; 23S rRNA(m5U1939)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_0 similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 434.0
  • Bit_score: 864
  • Evalue 8.20e-248
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Klebsiella variicola (strain At-22) RepID=D3RIR8_KLEVT similarity UNIREF
DB: UNIREF100
  • Identity: 99.5
  • Coverage: 434.0
  • Bit_score: 864
  • Evalue 5.80e-248
  • rbh
rumA; 23S rRNA methyltransferase similarity KEGG
DB: KEGG
  • Identity: 99.8
  • Coverage: 434.0
  • Bit_score: 865
  • Evalue 7.40e-249

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Taxonomy

Klebsiella variicola → Klebsiella → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1305
ATGGCGCAATTCTACTCTGCAAAACGGCGTGTGACGACGCGCCAGATCATAACCGTTACAGTCAATGACCTCGATCCCTTTGGTCAGGGCGTTGCCCGCCACCAGGGGAAGGCGCTGTTCGTGAGCGGTTTGCTGCCGCAGGAGCAGGCCGAGGTGGTGCTGGTGGAAGACAAAAAACAGTACGCCCGCGCCCAGGTGAAACGCCGTCTAACCGACAGCCCGCAGCGCCAGGCGCCGCGCTGCCCGCATTTTGGCGTCTGCGGCGGCTGCCAACAGCAGCATGCCAGCGTCGCGCTTCAGCAGCAAAGTAAACGTGCCGCGCTGGCGCGGCTGATGAAGCGTGAGGTGGATGAGGTCATCGCCGGCATGCCGTGGGGCTACCGCCGTCGCGCGCGCTTAAGCTTGAATTATCAGCCAAAGACCCAACAATTGCAGATGGGTTTTCGCCAGGCCAACGCCAAAGCGATCGTCGATGTGGTGCAATGCCCTGTTTTGGTGCCCCAGCTTGAGGCATTGCTGCCCGCCGTGCGCGAGTGCTTAAGCGCGCTGAGCGCATTACGCCACCTCGGTCACGTCGAGCTGGTGCAGGCGGACAACGGCCCGCTGATGGTGCTGCGCCATACCGCTGCCCTGCCAGCGGGCGACAGGGAAAAACTGGAACGCTTTTCGCAAACTCACGGTCTTTCCCTGTACCTCGCGCCGCAAAGCGAGATACTGGAACATATTCATGGCGAAGCGCCATGGTATACCTCAGACGGACTACGCTTAGTGTTCAGTCCGCGGGATTTTATCCAGGTCAACGACGGCGTGAATCAGCAGATGGTGCGTACTGCGCTGGAATGGCTGGATCTGCAGCCAGAGGACCGGGTACTGGATCTGTTCTGCGGGATGGGTAACTTTACCCTGCCGCTGGCGACGCGAGCCGCCCAGGTGGTGGGGGTGGAAGGGGTGCCCGCGCTGGTAGAAAAGGGGCGAGAAAACGCCGCCCTCAATGGTTTATCAAATGTCACTTTCTTCCATGAAAATCTGGAGGAGGATGTCACCCGTCAGGCCTGGGCGAAGCACGGCTTTGATAAAGTGCTGCTGGACCCGGCCCGCGCCGGCGCGCCGGGCGTGATGCCGCATATTATAAAACTGGCACCGCGGCGGGTGGTGTATGTTTCCTGCAACCCGGCGACGCTGGCGCGAGACAGCGAAACCCTGTTGCAGGCTGGATATCAGATTCAACGCCTGGCGATGCTGGATATGTTCCCGCATACCGGTCATCTGGAATCAATGGTGTTGTTTGAGCGCAGGCTTACATAA
PROTEIN sequence
Length: 435
MAQFYSAKRRVTTRQIITVTVNDLDPFGQGVARHQGKALFVSGLLPQEQAEVVLVEDKKQYARAQVKRRLTDSPQRQAPRCPHFGVCGGCQQQHASVALQQQSKRAALARLMKREVDEVIAGMPWGYRRRARLSLNYQPKTQQLQMGFRQANAKAIVDVVQCPVLVPQLEALLPAVRECLSALSALRHLGHVELVQADNGPLMVLRHTAALPAGDREKLERFSQTHGLSLYLAPQSEILEHIHGEAPWYTSDGLRLVFSPRDFIQVNDGVNQQMVRTALEWLDLQPEDRVLDLFCGMGNFTLPLATRAAQVVGVEGVPALVEKGRENAALNGLSNVTFFHENLEEDVTRQAWAKHGFDKVLLDPARAGAPGVMPHIIKLAPRRVVYVSCNPATLARDSETLLQAGYQIQRLAMLDMFPHTGHLESMVLFERRLT*