ggKbase home page

NECEvent2014_8_2_scaffold_185_24

Organism: NECEvent2014_8_2_Clostridium_butyricum_28_32

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 27606..28796

Top 3 Functional Annotations

Value Algorithm Source
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 396.0
  • Bit_score: 797
  • Evalue 1.10e-227
trpB; tryptophan synthase beta chain (EC:4.2.1.20) similarity KEGG
DB: KEGG
  • Identity: 78.6
  • Coverage: 388.0
  • Bit_score: 634
  • Evalue 1.50e-179
Tryptophan synthase beta chain n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AWU8_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 396.0
  • Bit_score: 797
  • Evalue 8.00e-228
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Clostridium sp. IBUN125C → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1191
ATGAGTTGTAGATTTAATGATTATGGTGGACAGTACGTTCCAGAAAATATATTAAAGGCATTAAATGAATTGGAAGCAGAATATGAAAAAGCTAAAAATGATAAAACTTTCTGGGATGAATATAAGTATTATTTACGTTATTATACAGGAAGACCAAGCCCACTATACTATGCAGAAAATATTACAAAGGATTTAGGCGGTGCTAAGATTTACTTAAAGAGGGAAGATTTAAACCATACCGGTGCTCATAAAATAAATAATGCTATTGGTCAAGTTATTCTTGCTAAAAGAATGGGTAAGAAAAAGGTTATAGCAGAAACTGGCGCAGGGCAACATGGAGTTGCAACTGCAACTGTTGCAGCTAAATTTGGAATGGAATGTAAAATATTTATGGGCGAGGAAGATATGAAAAGACAGGCACTTAATGTTAAAAAGATGGAATTACTGGGTGCAGAAGTTGTTCCTGCAATGAGTGGTACAAGAACTCTTAATGATGCAGTTAATGAAGCACTCAATTACTGGGCTGATAATTGTAGTGAAACATTTTATCTTTTAGGTTCAGCTGTTGGACCACATCCATATCCTACAATAGTAAGGGATTTTCAAAGGGTAATTGGAGATGAAGCTAAAAAACAGATAATGGAACTTGAAGGTCGTCTTCCGGATTATATATTAGCACCTGTTGGAGGAGGAAGTAATGCAATAGGTATTTTCTATCCTTTTATAGATGATAAAGAAGTACAACTTGTAGGAGTTGAAGCAGCAGGAAAAGGTGTCGATACAGAGCTTACAGCAGCAACAATAAGTAAAGGTGAAAGGGGGATTATACATGGAATGAACACATATGTGCTTCATGATAAGAATGGAAATATTGCTGAGGCTTATTCAATATCAGCAGGTCTTGATTATCCAGGTGTAGGTCCTGAACATGCCTTTCTTGCTGATACAAAAAGGGCTGAGTATAAGGCTATAACTGATGATGAAGCTGTAGATGCTTTCTTGTATTTAACAAAACTAGAAGGTATAGTACCTGCAATAGAGTCATCTCATGCACTTGCTCAGGCTAAAAAGCTTGCACCAAAACTTGATGCTGACAAGATTATAATTGTTAACTTATCAGGAAGAGGAGATAAAGATATGGATGCAATGTTGGAATATTTAGAAAGGAATAATAAAGATAATAATGTTTAA
PROTEIN sequence
Length: 397
MSCRFNDYGGQYVPENILKALNELEAEYEKAKNDKTFWDEYKYYLRYYTGRPSPLYYAENITKDLGGAKIYLKREDLNHTGAHKINNAIGQVILAKRMGKKKVIAETGAGQHGVATATVAAKFGMECKIFMGEEDMKRQALNVKKMELLGAEVVPAMSGTRTLNDAVNEALNYWADNCSETFYLLGSAVGPHPYPTIVRDFQRVIGDEAKKQIMELEGRLPDYILAPVGGGSNAIGIFYPFIDDKEVQLVGVEAAGKGVDTELTAATISKGERGIIHGMNTYVLHDKNGNIAEAYSISAGLDYPGVGPEHAFLADTKRAEYKAITDDEAVDAFLYLTKLEGIVPAIESSHALAQAKKLAPKLDADKIIIVNLSGRGDKDMDAMLEYLERNNKDNNV*