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NECEvent2014_8_2_scaffold_197_22

Organism: NECEvent2014_8_2_Clostridium_butyricum_28_32

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(23681..27181)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=997898 species="Bacteria; Fi similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2287
  • Evalue 0.0
mfd; transcription-repair-coupling factor Mfd (EC:3.6.4.-) similarity KEGG
DB: KEGG
  • Identity: 85.0
  • Coverage: 999.99
  • Bit_score: 2013
  • Evalue 0.0
Transcription-repair-coupling factor n=2 Tax=Clostridium butyricum RepID=M8JEP6_CLOBU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 999.99
  • Bit_score: 2287
  • Evalue 0.0
  • rbh

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Taxonomy

Clostridium butyricum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3501
ATGAGATTGAAGGGGTTATTAGAGCCCTTTGAAAATAGTGTTGAATTTGAAAATATATTAGGAAGTATTAATAACGAAAGATATCCTATTGGTATATATGGAATTGCTGAATCGGGAAGAGTTTATACTATTGATAGTATCTTTGAAAATATAGATAGATCTATGGTAATAGTTACTCAAAGTGATATGGAAGCTAAAAATATATATGAGGATTTATTGTTATATACTAATGATGTTCACTATTTTCCAGCGAAGGAAATGGTTTTCTATAATATAGATGCTATTTCGGGTGATTTAAGATGGGCGAGACTAAAAGTTATAAATGAAATTTTAAAAAAGAAGAAAAAGATAATAGTAACCTCAATAGATGCTTTTTCAGCAAGATACACTCCTCATAAATTGTTTGCAGATTATACAATGAAGTTTAAAGAAAGCGATGAAATAAACCTCATTGAAGTATCTAAAAAACTTATACAATCGGGTTATGAGAGAGTTGAAATGGTTGAAGGAAAGGGGCAGTTCGCATTGAGAGGGGGAATACTTGATGTATTTCCTACATGTTCGGCTTATCCTTATAGAATTGAACTTTTCGGTGATGAAATTGACTCTATAAGAACTTTCAATACAGAATCACAGAGAAGTATTGATAAAGTTAAGAGGATAGAGGTATTTCCAGCAAAAGAAATAATAATAACAGATGAAACTATTTCTTTAGGTAAAGAAAAGTTAAAAAAAGAATTTGATAATATATCAAAAAGTGATACTGATTCAGCTAGGGTAGAAAAATTAAGAAATATATTAAATAAAAACTTAGAATCATTGGAAGAAACTTCAACATTTGAAACTATAGATAGTTATCTTCCTTATTTCTGCAAAGAAACAGAAAGTCTTTTTGATTATCTTAAGGATTGTTTATTTATAATTGATGATGTTCAAAGGTGCGAAGGAAAACTTGATTCAACATATTTAGAATTTGAAGAGAACTTTACTGCATTTTCTCAAAGGGGAGATATATTTCCGAAACAAGGTGAACTTTTAATAAGCAAAGAGGAAGTAATTGAATCTTTTAAAGATAAAAAAGTTGTATTTTTAGATGGATTGGTTAAGAAAAATTCATGGTTTAATCCATATACAACAGTTAATATTTCAGAAAGAACATTAAATAACTATCAAGGTCAGTTGGATTTATTAATAGATGAAATATCTGATAAGAAAAATCAAGGATACAAGATAGTAATTTTATCAGGAACAAGGGCTAGGGGCGAACGTTTAGTAGGAACTTTAAGAGATAGAGGTATAGAAAGTTCTTATAAAGACACAGTTGATAATATTCAATATGGTGAAGTTGTAATTACATTTGGTAACCAACTTCATGGTTTTCAATATCCTGAATATAAAGTTTGCGTAATATCAGATAAAGAAGTTTTTGGAGAAGCTAAAAGAAAGCTTAAGAAAACTAAATCAAAGAGAAAAGGTATTGCCAAAATAAAAAGCTTTGCTGAATTAAAACCTGGTGATTATGTAGTACATGCAAATCATGGAATAGGTGTTTATAAGGGAATAAAGCAAATAGAAGTTGCTGGTCATAAGAGAGATTACCTTGATATTGTTTATGATAAAGGTGATAAGTTATATGTTCCTGTAGACCAACTTGATTTAATTCAAAAATATGTAGGTAGTGAAGGAAAAAGTCCTAAGGTAAATAAACTTGGAAGTGCTGAATGGCAAAAGGCTAAAGCGAAAGTAAGAAAATCTATTAATGAAATTGCTGAGGATTTAGTAAAATTATATGCTATGAGAACTACAGTAAAAGGACATAAATTTTCAAAGGATACTCAATGGCAGAAACAATTTGAAGATGAATTTCCATACGATGAAACTCCAGATCAATTAACTTCGTTAGAAGAAATAAAAGCTGATATGGAATCAGATAAACCTATGGATAGACTTTTATGTGGAGACGTAGGATATGGAAAAACCGAAGTGGCTTTAAGGGCAGCTTTTAAAGCAGTTATGGATGGAAAGCAAGTTGCACTTCTTGTTCCAACTACAATTTTAGCAGAACAGCATTATAAAAATATGAAAAATAGATTTTCAGACTTTCCTATAAAAATAGATATGGTAAGTAGATTTAGAAGTGCTAAAGAGCAGAAAGAAACCCTTCAGAAAGTAAAAGAAGGAAATATTGATATTCTTGTGGGGACTCACAGACTTGTATCAAAAGATATTCAATTTAAAGATTTAGGACTTTTAATTGTTGATGAAGAGCAGAGATTTGGAGTAAAACAAAAAGAGAAAATTAAAAATATTAAGAAGAATGTAGATGTACTGACATTAAGTGCAACACCAATACCTAGAACTCTTCATATGTCGCTAAGTGGTGTGAGGGATATATCTGTTATAGAAACTCCCCCAGAAGAGAGATATCCTGTTCAGACATATGTTGTTGAGCAGAATGATCAGCTAATAAGAGATGCTATTTTAAGAGAAATAGGAAGAGGCGGACAGGTATATTTTGTATACAATAGAGTAGAAAATATTGATGCTATAGCTAAGTATGTGCAAAATCTTGTTCCGGAGAGCAAGGTTGGTGTAATACATGGTCAGATGGCTGAAAGACAGCTTGAGCAAGAAATGTTCAATTTTATGGACCAGACATATAATGTTCTTGTATGTACGACTATTATAGAAACTGGTATGGATATTCAAAATGTTAATACAATTATTGTTTATGATGCTGATAAAATGGGATTATCGCAGCTTTATCAGTTAAGAGGAAGAGTTGGAAGATCTAATAGAATAGCATATGCTTATTTATTATATACAAAGGATAAGATTTTAACTGAAGTTGCAGAGAAAAGATTGAAAGCATTAAAAGATTTTACTGAACTTGGTTCTGGATTCAAAATTGCAATGAGAGATCTTGAAATAAGAGGTGCCGGAAACATGATGGGATCATCTCAACATGGTCACATGGCAGCTATTGGTTATGATTTGTATTGTAGAATGTTAGAAGATACTGTTAAGCTTATAAGGGGAGAAATTCAAAAAGAACCAGTAGAAACAACTGTAGATGTTAAAGTAGATGCATTCATATCTGCAGATTATATTGAAGATGAAATTCAAAAAATTGAAGTATATAAAAAGATTGCAGCAATTGATAGTGTGGATGAATATGAAGATATTAAAGAAGAGCTAGAAGATAGATATTCTACAATACCTAATCCAGTTCGTAATCTTATGGATATTGCTTATATAAAAAGTCAGGCAAAATCACTGTTTATTGAAGAAATAAAAGAGATGCCAAGAGAAATAGTATTCAGATTTGCAGAAGGTGAAAGTGATTATAAGAATATATATAAGCTTTTAATTGAAAAATATAAAGATAGTGTAGTATTAAAATTTGGATTAAATCCGTATTTCTCATTTAAATTAAAAGACATTAAGCAGGAGAATAAGTTGGAGTTCCTAAAAGAAGTTTTTAATGACATAATATTGTAA
PROTEIN sequence
Length: 1167
MRLKGLLEPFENSVEFENILGSINNERYPIGIYGIAESGRVYTIDSIFENIDRSMVIVTQSDMEAKNIYEDLLLYTNDVHYFPAKEMVFYNIDAISGDLRWARLKVINEILKKKKKIIVTSIDAFSARYTPHKLFADYTMKFKESDEINLIEVSKKLIQSGYERVEMVEGKGQFALRGGILDVFPTCSAYPYRIELFGDEIDSIRTFNTESQRSIDKVKRIEVFPAKEIIITDETISLGKEKLKKEFDNISKSDTDSARVEKLRNILNKNLESLEETSTFETIDSYLPYFCKETESLFDYLKDCLFIIDDVQRCEGKLDSTYLEFEENFTAFSQRGDIFPKQGELLISKEEVIESFKDKKVVFLDGLVKKNSWFNPYTTVNISERTLNNYQGQLDLLIDEISDKKNQGYKIVILSGTRARGERLVGTLRDRGIESSYKDTVDNIQYGEVVITFGNQLHGFQYPEYKVCVISDKEVFGEAKRKLKKTKSKRKGIAKIKSFAELKPGDYVVHANHGIGVYKGIKQIEVAGHKRDYLDIVYDKGDKLYVPVDQLDLIQKYVGSEGKSPKVNKLGSAEWQKAKAKVRKSINEIAEDLVKLYAMRTTVKGHKFSKDTQWQKQFEDEFPYDETPDQLTSLEEIKADMESDKPMDRLLCGDVGYGKTEVALRAAFKAVMDGKQVALLVPTTILAEQHYKNMKNRFSDFPIKIDMVSRFRSAKEQKETLQKVKEGNIDILVGTHRLVSKDIQFKDLGLLIVDEEQRFGVKQKEKIKNIKKNVDVLTLSATPIPRTLHMSLSGVRDISVIETPPEERYPVQTYVVEQNDQLIRDAILREIGRGGQVYFVYNRVENIDAIAKYVQNLVPESKVGVIHGQMAERQLEQEMFNFMDQTYNVLVCTTIIETGMDIQNVNTIIVYDADKMGLSQLYQLRGRVGRSNRIAYAYLLYTKDKILTEVAEKRLKALKDFTELGSGFKIAMRDLEIRGAGNMMGSSQHGHMAAIGYDLYCRMLEDTVKLIRGEIQKEPVETTVDVKVDAFISADYIEDEIQKIEVYKKIAAIDSVDEYEDIKEELEDRYSTIPNPVRNLMDIAYIKSQAKSLFIEEIKEMPREIVFRFAEGESDYKNIYKLLIEKYKDSVVLKFGLNPYFSFKLKDIKQENKLEFLKEVFNDIIL*