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NECEvent2014_8_2_scaffold_946_9

Organism: NECEvent2014_8_2_Clostridium_perfringens_28_19

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(6338..7156)

Top 3 Functional Annotations

Value Algorithm Source
AP endonuclease, family 2 n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TRF9_CLOP1 similarity UNIREF
DB: UNIREF100
  • Identity: 99.6
  • Coverage: 272.0
  • Bit_score: 547
  • Evalue 9.90e-153
  • rbh
AP endonuclease similarity KEGG
DB: KEGG
  • Identity: 99.6
  • Coverage: 272.0
  • Bit_score: 547
  • Evalue 2.80e-153
AP endonuclease {ECO:0000313|EMBL:EIA17257.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 272.0
  • Bit_score: 545
  • Evalue 3.10e-152

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 819
ATGGAAAAACTTTTATTTGGAATTTCAGGTTTACCAATAGGAGAAGAGGGCCAGAAATTCAATTACTCAACAGGAATTGAATACTTAAAAAAAATAGGACTAGAAGCTATGGAGCTTCCTTTTGTTAGATCCGTTAATGTTACAGCTAAAAACAGAGATAAAATAATAGAAGCTAAAGAAAAAAATGATTTTTATCTTTCAGCTCATGGTTCTTATTTTATAAATTTAAATGCTGAAGAAGAGGAAAAGAAAGAAAAATCTATTGAAAGAATACTTAAAGGTGCTGAAGCATTAAAAAGTGTTGGAGGTAGAAGCTTAGTATTCCATCCAGGATTTTATTTAAAAGCTTCAAAAGAAGAAGCTTTAGAGGAAATAAAGAAAAACTTAAAGAAACTACCTTATGAAGGTGTAGATTATAGATTAGAAACTACAGGTAAGGGAACTCAATTCGGAAACCTACAAGAATTAGTTGATATATGTAAAGAAGTGCCATCTTGCAAATTATGTATTGATTTTTCTCATATACATGCTAGAGGAATTGGTGCTTTAAAAGAATATAAAGATTTTGCAGAAATTTTAGAATATATAAAAGATAATTTAGGAAATGAAGCCTTAGAAGATTTACATATTCACATGTCTGGAATTCACTACACAGACAAAGGGGAAAGAAACCACTTACCTTTTTTAGAAAGTGATTTTAACTTTATTGAATGCTTAAGGGCACTTAAGGATTATAAAGTAAAGGGATGTATAATATGTGAAAGTCCTCTTTTAGAAAAAGATGCCTTATTACTAAAAGAAACTTATGAAAAATTATAA
PROTEIN sequence
Length: 273
MEKLLFGISGLPIGEEGQKFNYSTGIEYLKKIGLEAMELPFVRSVNVTAKNRDKIIEAKEKNDFYLSAHGSYFINLNAEEEEKKEKSIERILKGAEALKSVGGRSLVFHPGFYLKASKEEALEEIKKNLKKLPYEGVDYRLETTGKGTQFGNLQELVDICKEVPSCKLCIDFSHIHARGIGALKEYKDFAEILEYIKDNLGNEALEDLHIHMSGIHYTDKGERNHLPFLESDFNFIECLRALKDYKVKGCIICESPLLEKDALLLKETYEKL*