ggKbase home page

NECEvent2014_8_2_scaffold_1188_5

Organism: NECEvent2014_8_2_Enterobacter_cloacae-rel_56_233_partial

partial RP 20 / 55 MC: 4 BSCG 16 / 51 MC: 2 ASCG 9 / 38 MC: 2
Location: 3563..5503

Top 3 Functional Annotations

Value Algorithm Source
RNase E specificity factor CsrD n=2 Tax=Enterobacter cloacae complex RepID=V3MH52_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 99.8
  • Coverage: 646.0
  • Bit_score: 1267
  • Evalue 0.0
  • rbh
Regulatory protein CsrD {ECO:0000313|EMBL:KJP78499.1}; TaxID=61645 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter cloacae com similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 646.0
  • Bit_score: 1267
  • Evalue 0.0
regulatory protein CsrD similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 646.0
  • Bit_score: 1249
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Enterobacter asburiae → Enterobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1941
ATGCGATTAACGACGAAGTTCTCAGCTTTTATCACCTTGCTGACGGGGCTTACCATTTTTGTCACCCTTCTGGGCTGCTCTCTGAGCTTTTATAACGCCATTCAGGACAAACTGGTTAACCGGGTACAGTCTGTCGCGTCGGTAATTGATACGCGTCTGCTGACGACGCCGCTACCGGCACTCTCCAGGGAGCTCGATGAGTTGATGGTACCTGTTGATATTGTTCAGATCGACATTCAGCAGGGAAAGCATCGTGTGTTAAGCCACGAACGCCCGGGAAGCTATCGGCCTGCGGGCGTAGTGAGCCAGTATCGGGAAGTGACCGTACATTCCCTTAAAAATCCGGGGATGACCATACACATGGTCTATCTCGATCCGATGGCCAGCTATTTCCGTTCCATGATGACCACCGCGCCGCTCACCGTCGCGGTGGCGTTTATCGTCCTGCTGATCTTTCTCGCGGTCCGCTGGCTGCGCCGCCAGCTCTCCGGCCAGGAGCTGCTGGAGATGCGCTCCGTGCGGATCCTTAACGGTGAACGCGGCCCGCAGGTCCGTGGTTCAGTCCACGAATGGCCGTCACGCGCCAGCAGCGCGCTGGATACGCTGCTCTCGGAAATCCAGTTTGCCAGCGACCAGCGCAGCCGTATGGATACGCTGATCCGCTCCTATGCCGCGCAGGATAATAAAACCGGCCTCAACAACCGCCTTTTCTTTGATAATCAGCTCGCCACGCTGCTCGACGATTCGGAAAAAGTGGGGACGCACGGGGTGGTGATGATGATTCGCCTGCCTGATTTCGATCTCCTGCGCGACACCTGGGGACAGCGGGCCGCGGAAGAAAATCTCTTTACGCTGATCAACCTGCTCTCCACCTTTATTATGCGCTACCCGGGCGCGCTGCTGGCCCGCTACCACCGCAGCGACTTTGCCGTGTTGCTGCCGCATCGGACGCTGAAGGAGTCGGAAAGCATCGCCAGCCAGCTGCTGAAGGCGGTTGATGCGCTGCCGCAGAGCAAAATGCTCGACAGGGACGATATGGTCCACATGGGGATCTGCGCCTGGCGTGGCGGACAATCGACAGAACAGGTGATGGAGCATGCGGAAGCGGCCACCCGCAACGCCGTGCTGCAGGGCGCGAACGGATGGGCGGTCTATGATGATTCGCTGCCGGAAAAAGGGCGCGGTAACGTGCGCTGGCGTACGTTGATTGAGCAAATGCTAAGTCGCGGCGGACCGCGTATTTATCAAAAACCCGCGGTCATGAAAAACGGCAACGTTCATCACCGTGAACTGATGTGTCGTATTTTTGACGATACGGAAGAGGTTATTTCTGCGGAATATCTGCCAATGGTGCTGCAATTTGGGCTGTCCGAAGAGTATGACCGTCAGCAAATTAGCCGCTTGATTCCGTTTTTATCATTCTGGCCTGAAGAGAGCCTGGCGTTACAGGTCACCGTGGAGTCATTAATACGCCCGCGTTTTCAGCGCTGGCTGCGTGATACATTAATGCAATGCGAAAAATCGCAACGCAAACGCATTATTTTTGAACTTGCTGAGGCGGATGTAGGTCAACACATCAGCCGGTTACGTCCGGTGGTTCGTTTGATCAACGCGCTCGGCGCGCGCGTCGCGGTGACGCAGGCAGGTTTGACGCTGGTCAGCACCAACTGGATCAAGGAGCTGGATGTGGAGCTATTAAAGCTACATCCGGGGCTGGTAAGGAATATTGAAAAGCGCACGGAAAACCAGCTGCTGGTACAGAGCCTGGTTGAGGCGTGCAAAGGAACGCGAACACAGGTCTTTGCCGCGGGCGTGCGCGCCAGAGGCGAATGGCAAATGTTAACAGAGCGCGGTGTAATGGGTGGTCAGGGGGATTTTTTTGCTGCCTCTCAGCCGCTTGACACCAATGTGAAAAAATATTTGCAAAGATACTCGGTTTGA
PROTEIN sequence
Length: 647
MRLTTKFSAFITLLTGLTIFVTLLGCSLSFYNAIQDKLVNRVQSVASVIDTRLLTTPLPALSRELDELMVPVDIVQIDIQQGKHRVLSHERPGSYRPAGVVSQYREVTVHSLKNPGMTIHMVYLDPMASYFRSMMTTAPLTVAVAFIVLLIFLAVRWLRRQLSGQELLEMRSVRILNGERGPQVRGSVHEWPSRASSALDTLLSEIQFASDQRSRMDTLIRSYAAQDNKTGLNNRLFFDNQLATLLDDSEKVGTHGVVMMIRLPDFDLLRDTWGQRAAEENLFTLINLLSTFIMRYPGALLARYHRSDFAVLLPHRTLKESESIASQLLKAVDALPQSKMLDRDDMVHMGICAWRGGQSTEQVMEHAEAATRNAVLQGANGWAVYDDSLPEKGRGNVRWRTLIEQMLSRGGPRIYQKPAVMKNGNVHHRELMCRIFDDTEEVISAEYLPMVLQFGLSEEYDRQQISRLIPFLSFWPEESLALQVTVESLIRPRFQRWLRDTLMQCEKSQRKRIIFELAEADVGQHISRLRPVVRLINALGARVAVTQAGLTLVSTNWIKELDVELLKLHPGLVRNIEKRTENQLLVQSLVEACKGTRTQVFAAGVRARGEWQMLTERGVMGGQGDFFAASQPLDTNVKKYLQRYSV*