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NECEvent2014_8_2_Enterobacteriales_53_7_hint

NECEvent2014_8_2_Enterobacteriales_53_7
In projects: NECEvent2014_8_2

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: NECEvent2014_8_2_UNK

Properties

Avg. coverage: 7.05 Longest contig: 8.22 Kbp Bin length: 2.31 Mbp GC content: 52.94 %
Contigs count: 1344 Features count: 3189 rRNAs count: 0 tRNAs count: 15

Genome completeness

partial RP 3 / 55 BSCG 1 / 51 ASCG 4 / 38

Description

Refined from TS ESOM

Displaying items 51-100 of 1344 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_2_scaffold_4138 178_002_scaffold_4138
Species: Enterobacter sp. R4-368 (50%)
2 1027 bp 53.55 5.26 100.20
NECEvent2014_8_2_scaffold_2973 178_002_scaffold_2973
Species: Enterobacter sp. R4-368 (50%)
2 1554 bp 53.93 5.60 100.19
NECEvent2014_8_2_scaffold_2391 178_002_scaffold_2391
Species: Enterobacter sp. R4-368 (50%)
2 2078 bp 52.94 6.93 100.19
NECEvent2014_8_2_scaffold_2050 178_002_scaffold_2050
Species: Kosakonia radicincitans (50%)
2 2599 bp 57.64 6.35 100.19
NECEvent2014_8_2_scaffold_4066 178_002_scaffold_4066
Species: Kosakonia radicincitans (50%)
2 1045 bp 51.67 6.60 100.19
NECEvent2014_8_2_scaffold_2852 178_002_scaffold_2852
Species: Kosakonia sacchari (50%)
2 1635 bp 55.47 5.87 100.18
NECEvent2014_8_2_scaffold_2759 178_002_scaffold_2759
Order: Enterobacteriales (100%)
3 1704 bp 56.92 6.69 100.18
NECEvent2014_8_2_scaffold_3742 178_002_scaffold_3742
Species: Enterobacter cloacae (50%)
2 1162 bp 58.18 4.91 100.17
NECEvent2014_8_2_scaffold_2551 178_002_scaffold_2551
Species: Kluyvera ascorbata (50%)
2 1887 bp 56.92 4.85 100.16
NECEvent2014_8_2_scaffold_1770 178_002_scaffold_1770
Genus: Kosakonia (66.67%)
3 3235 bp 55.39 7.09 100.16
NECEvent2014_8_2_scaffold_3275 178_002_scaffold_3275
Species: Rahnella aquatilis (50%)
2 1372 bp 38.63 7.00 100.15
NECEvent2014_8_2_scaffold_3251 178_002_scaffold_3251
Species: Kosakonia radicincitans (100%)
2 1384 bp 51.59 4.99 100.15
NECEvent2014_8_2_scaffold_2177 178_002_scaffold_2177
Genus: Kosakonia (66.67%)
3 2409 bp 52.43 8.47 100.13
NECEvent2014_8_2_scaffold_2792 178_002_scaffold_2792
Species: Kosakonia radicincitans (50%)
2 1675 bp 61.85 7.34 100.12
NECEvent2014_8_2_scaffold_2786 178_002_scaffold_2786
Species: Citrobacter amalonaticus (50%)
2 1681 bp 58.00 5.71 100.12
NECEvent2014_8_2_scaffold_2502 178_002_scaffold_2502
Species: Kosakonia sacchari (50%)
2 1942 bp 58.34 7.26 100.10
NECEvent2014_8_2_scaffold_2450 178_002_scaffold_2450
Species: Enterobacter cloacae (50%)
2 1996 bp 56.16 8.04 100.10
NECEvent2014_8_2_scaffold_4176 178_002_scaffold_4176
Species: Dickeya zeae (50%)
2 1016 bp 56.99 7.38 100.10
NECEvent2014_8_2_scaffold_4150 178_002_scaffold_4150
Species: Enterobacter sp. R4-368 (50%)
2 1025 bp 59.61 7.02 100.10
NECEvent2014_8_2_scaffold_3638 178_002_scaffold_3638
Species: Kosakonia radicincitans (50%)
2 1196 bp 55.18 3.26 100.08
NECEvent2014_8_2_scaffold_3475 178_002_scaffold_3475
Species: Enterobacter sp. R4-368 (50%)
2 1271 bp 53.11 8.50 100.08
NECEvent2014_8_2_scaffold_3408 178_002_scaffold_3408
Order: Enterobacteriales (75%)
4 1301 bp 54.80 6.00 100.08
NECEvent2014_8_2_scaffold_3345 178_002_scaffold_3345
Species: Escherichia coli (50%)
2 1331 bp 60.78 6.09 100.08
NECEvent2014_8_2_scaffold_3165 178_002_scaffold_3165
Species: Enterobacter sp. R4-368 (50%)
2 1439 bp 61.22 6.46 100.07
NECEvent2014_8_2_scaffold_3161 178_002_scaffold_3161
Species: Enterobacter sp. R4-368 (50%)
2 1442 bp 58.67 7.28 100.07
NECEvent2014_8_2_scaffold_2960 178_002_scaffold_2960
Species: Enterobacter sp. YD4 (50%)
2 1562 bp 56.98 6.91 100.06
NECEvent2014_8_2_scaffold_2823 178_002_scaffold_2823
Species: Kosakonia sacchari (66.67%)
3 1652 bp 53.63 6.36 100.06
NECEvent2014_8_2_scaffold_2776 178_002_scaffold_2776
Species: Kosakonia radicincitans (66.67%)
3 1688 bp 57.29 4.35 100.06
NECEvent2014_8_2_scaffold_2672 178_002_scaffold_2672
Species: Enterobacter sp. R4-368 (66.67%)
3 1781 bp 62.16 7.33 100.06
NECEvent2014_8_2_scaffold_2258 178_002_scaffold_2258
Genus: Citrobacter (66.67%)
3 2273 bp 57.28 5.41 100.04
NECEvent2014_8_2_scaffold_2832 178_002_scaffold_2832
Species: Pectobacterium carotovorum (50%)
2 1647 bp 58.04 8.47 100.00
NECEvent2014_8_2_scaffold_3378 178_002_scaffold_3378
Species: Citrobacter farmeri (100%)
1 1314 bp 65.14 9.13 100.00
NECEvent2014_8_2_scaffold_3125 178_002_scaffold_3125
Species: Methylomicrobium album (50%)
2 1461 bp 54.21 5.34 100.00
NECEvent2014_8_2_scaffold_4105 178_002_scaffold_4105
Species: Klebsiella pneumoniae (50%)
2 1035 bp 55.94 4.35 100.00
NECEvent2014_8_2_scaffold_3910 178_002_scaffold_3910
Species: Enterobacter lignolyticus (100%)
1 1098 bp 52.64 4.92 100.00
NECEvent2014_8_2_scaffold_3469 178_002_scaffold_3469
Species: Kosakonia radicincitans (50%)
2 1275 bp 55.69 8.00 100.00
NECEvent2014_8_2_scaffold_3215 178_002_scaffold_3215
Species: Cronobacter malonaticus (100%)
1 1410 bp 57.02 4.79 100.00
NECEvent2014_8_2_scaffold_4211 178_002_scaffold_4211
Species: Enterobacter sp. R4-368 (100%)
1 1005 bp 54.83 5.37 100.00
NECEvent2014_8_2_scaffold_3769 178_002_scaffold_3769
Species: Klebsiella pneumoniae (50%)
2 1152 bp 56.16 5.21 100.00
NECEvent2014_8_2_scaffold_3033 178_002_scaffold_3033
Species: Rahnella aquatilis (100%)
1 1512 bp 58.00 6.15 100.00
NECEvent2014_8_2_scaffold_3547 178_002_scaffold_3547
Species: Klebsiella quasipneumoniae (50%)
2 1236 bp 58.90 6.80 100.00
NECEvent2014_8_2_scaffold_3042 178_002_scaffold_3042
Species: Escherichia coli (100%)
1 1506 bp 56.71 6.97 100.00
NECEvent2014_8_2_scaffold_4030 178_002_scaffold_4030
Species: Escherichia coli (100%)
1 1062 bp 41.24 5.08 100.00
NECEvent2014_8_2_scaffold_3833 178_002_scaffold_3833
Species: Kosakonia radicincitans (50%)
2 1122 bp 56.86 7.49 100.00
NECEvent2014_8_2_scaffold_3079 178_002_scaffold_3079
Species: Klebsiella oxytoca (100%)
1 1485 bp 57.71 6.26 100.00
NECEvent2014_8_2_scaffold_3849 178_002_scaffold_3849
Species: Citrobacter koseri (100%)
1 1119 bp 55.41 5.09 100.00
NECEvent2014_8_2_scaffold_4070 178_002_scaffold_4070
Species: Kosakonia radicincitans (100%)
1 1044 bp 59.29 5.46 100.00
NECEvent2014_8_2_scaffold_3871 178_002_scaffold_3871
Species: Serratia odorifera (100%)
1 1113 bp 52.83 5.12 100.00
NECEvent2014_8_2_scaffold_3878 178_002_scaffold_3878
Species: Pantoea stewartii (50%)
2 1110 bp 55.95 8.11 100.00
NECEvent2014_8_2_scaffold_2300 178_002_scaffold_2300
Species: Enterobacter cloacae (50%)
2 2215 bp 57.25 7.45 99.95
Displaying items 51-100 of 1344 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.