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NECEvent2014_8_2_Enterobacteriales_53_7_hint

NECEvent2014_8_2_Enterobacteriales_53_7
In projects: NECEvent2014_8_2

Consensus taxonomy: Enterobacteriales  →  Gammaproteobacteria  →  Proteobacteria  →  Bacteria

Metagenomic Context

Parent: NECEvent2014_8_2_UNK

Properties

Avg. coverage: 7.05 Longest contig: 8.22 Kbp Bin length: 2.31 Mbp GC content: 52.94 %
Contigs count: 1344 Features count: 3189 rRNAs count: 0 tRNAs count: 15

Genome completeness

partial RP 3 / 55 BSCG 1 / 51 ASCG 4 / 38

Description

Refined from TS ESOM

Displaying items 1-50 of 1344 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_8_2_scaffold_3569 178_002_scaffold_3569
Species: Enterobacter cloacae (50%)
2 1223 bp 59.04 3.92 104.50
NECEvent2014_8_2_scaffold_4034 178_002_scaffold_4034
Species: Enterobacter cloacae (50%)
2 1059 bp 55.90 6.52 103.40
NECEvent2014_8_2_scaffold_2245 178_002_scaffold_2245
Genus: Enterobacter (66.67%)
3 2289 bp 57.23 7.47 102.88
NECEvent2014_8_2_scaffold_3155 178_002_scaffold_3155
Species: Enterobacter sp. YD4 (50%)
2 1445 bp 58.13 6.44 102.77
NECEvent2014_8_2_scaffold_2051 178_002_scaffold_2051
Species: Kosakonia sacchari (60%)
5 2599 bp 58.21 4.79 102.50
NECEvent2014_8_2_scaffold_3623 178_002_scaffold_3623
Species: Enterobacter cloacae (50%)
2 1205 bp 55.44 6.22 101.83
NECEvent2014_8_2_scaffold_3420 178_002_scaffold_3420
Order: Enterobacteriales (66.67%)
3 1294 bp 55.95 8.58 101.78
NECEvent2014_8_2_scaffold_2952 178_002_scaffold_2952
Species: Kosakonia radicincitans (66.67%)
3 1571 bp 59.77 5.92 101.59
NECEvent2014_8_2_scaffold_2707 178_002_scaffold_2707
Species: Kosakonia radicincitans (66.67%)
3 1752 bp 39.16 6.34 101.20
NECEvent2014_8_2_scaffold_2790 178_002_scaffold_2790
Genus: Dickeya (100%)
3 1679 bp 55.93 6.25 101.13
NECEvent2014_8_2_scaffold_4183 178_002_scaffold_4183
Order: Enterobacteriales (100%)
3 1012 bp 55.04 7.41 101.09
NECEvent2014_8_2_scaffold_4055 178_002_scaffold_4055
Species: Enterobacter cancerogenus (50%)
2 1051 bp 56.61 8.14 101.05
NECEvent2014_8_2_scaffold_4073 178_002_scaffold_4073
Species: Escherichia vulneris (100%)
2 1043 bp 59.64 4.60 100.96
NECEvent2014_8_2_scaffold_3472 178_002_scaffold_3472
Species: Citrobacter freundii (50%)
2 1272 bp 56.53 4.95 100.94
NECEvent2014_8_2_scaffold_2711 178_002_scaffold_2711
Species: Enterobacter cloacae (50%)
2 1748 bp 56.69 5.84 100.91
NECEvent2014_8_2_scaffold_3820 178_002_scaffold_3820
Species: Cedecea neteri (50%)
2 1130 bp 60.44 6.50 100.89
NECEvent2014_8_2_scaffold_2407 178_002_scaffold_2407
Species: Citrobacter sp. MGH 55 (50%)
2 2047 bp 58.72 5.94 100.83
NECEvent2014_8_2_scaffold_3146 178_002_scaffold_3146
Order: Enterobacteriales (100%)
3 1449 bp 57.00 6.21 100.83
NECEvent2014_8_2_scaffold_3884 178_002_scaffold_3884
Order: Enterobacteriales (66.67%)
3 1107 bp 53.84 6.78 100.81
NECEvent2014_8_2_scaffold_3784 178_002_scaffold_3784
Species: Kosakonia radicincitans (100%)
3 1146 bp 58.64 7.59 100.79
NECEvent2014_8_2_scaffold_3344 178_002_scaffold_3344
Species: Enterobacter sp. YD4 (50%)
2 1331 bp 55.15 6.87 100.75
NECEvent2014_8_2_scaffold_2566 178_002_scaffold_2566
Species: Escherichia vulneris (100%)
3 1868 bp 57.33 6.75 100.70
NECEvent2014_8_2_scaffold_3627 178_002_scaffold_3627
Species: Kosakonia radicincitans (50%)
2 1201 bp 55.70 6.74 100.67
NECEvent2014_8_2_scaffold_4022 178_002_scaffold_4022
Species: Citrobacter werkmanii (50%)
2 1064 bp 58.27 5.92 100.66
NECEvent2014_8_2_scaffold_2592 178_002_scaffold_2592
Order: Enterobacteriales (100%)
3 1836 bp 57.63 4.74 100.65
NECEvent2014_8_2_scaffold_3841 178_002_scaffold_3841
Species: Pantoea sp. 3.5.1 (50%)
2 1121 bp 60.12 6.69 100.62
NECEvent2014_8_2_scaffold_3416 178_002_scaffold_3416
Species: Citrobacter amalonaticus (100%)
2 1297 bp 51.73 4.39 100.62
NECEvent2014_8_2_scaffold_4157 178_002_scaffold_4157
Genus: Citrobacter (66.67%)
3 1023 bp 57.18 8.50 100.59
NECEvent2014_8_2_scaffold_3193 178_002_scaffold_3193
Species: Enterobacter sp. R4-368 (50%)
2 1423 bp 54.60 5.90 100.56
NECEvent2014_8_2_scaffold_2577 178_002_scaffold_2577
Species: Escherichia coli (50%)
2 1850 bp 56.86 7.38 100.54
NECEvent2014_8_2_scaffold_3867 178_002_scaffold_3867
Order: Enterobacteriales (100%)
3 1113 bp 55.17 6.20 100.54
NECEvent2014_8_2_scaffold_4167 178_002_scaffold_4167
Species: Enterobacter sp. R4-368 (50%)
2 1021 bp 52.40 5.88 100.49
NECEvent2014_8_2_scaffold_3141 178_002_scaffold_3141
Species: Citrobacter youngae (50%)
2 1451 bp 58.65 7.03 100.48
NECEvent2014_8_2_scaffold_3084 178_002_scaffold_3084
Species: Kosakonia sacchari (66.67%)
3 1481 bp 60.57 5.06 100.47
NECEvent2014_8_2_scaffold_2279 178_002_scaffold_2279
Species: Kosakonia radicincitans (66.67%)
3 2243 bp 57.74 5.62 100.45
NECEvent2014_8_2_scaffold_2945 178_002_scaffold_2945
Genus: Kosakonia (50%)
4 1574 bp 56.99 8.67 100.45
NECEvent2014_8_2_scaffold_1973 178_002_scaffold_1973
Genus: Enterobacter (60%)
5 2724 bp 51.54 5.78 100.44
NECEvent2014_8_2_scaffold_1744 178_002_scaffold_1744
Order: Enterobacteriales (100%)
3 3311 bp 55.30 6.43 100.39
NECEvent2014_8_2_scaffold_2393 178_002_scaffold_2393
Species: Cedecea neteri (100%)
2 2074 bp 42.48 4.63 100.39
NECEvent2014_8_2_scaffold_4075 178_002_scaffold_4075
Species: Kosakonia radicincitans (50%)
2 1043 bp 60.40 5.47 100.38
NECEvent2014_8_2_scaffold_3971 178_002_scaffold_3971
Species: Klebsiella pneumoniae (50%)
2 1079 bp 52.55 8.06 100.37
NECEvent2014_8_2_scaffold_3918 178_002_scaffold_3918
Species: Enterobacter sp. 35669 (50%)
2 1097 bp 57.16 4.38 100.37
NECEvent2014_8_2_scaffold_4080 178_002_scaffold_4080
Species: Enterobacter sp. R4-368 (50%)
2 1041 bp 60.33 4.61 100.29
NECEvent2014_8_2_scaffold_3714 178_002_scaffold_3714
Species: Rahnella aquatilis (50%)
2 1170 bp 59.83 4.87 100.26
NECEvent2014_8_2_scaffold_2813 178_002_scaffold_2813
Species: Enterobacter sp. R4-368 (50%)
4 1664 bp 53.97 7.93 100.24
NECEvent2014_8_2_scaffold_3342 178_002_scaffold_3342
Species: Klebsiella pneumoniae (50%)
2 1332 bp 59.38 7.09 100.23
NECEvent2014_8_2_scaffold_3318 178_002_scaffold_3318
Species: Enterobacter cloacae (50%)
2 1350 bp 57.33 5.33 100.22
NECEvent2014_8_2_scaffold_3147 178_002_scaffold_3147
Order: Enterobacteriales (100%)
3 1449 bp 51.83 8.28 100.21
NECEvent2014_8_2_scaffold_3097 178_002_scaffold_3097
Species: Pantoea sp. PSNIH2 (50%)
2 1473 bp 58.86 7.23 100.20
NECEvent2014_8_2_scaffold_3058 178_002_scaffold_3058
Species: Kosakonia sacchari (50%)
2 1497 bp 64.93 5.81 100.20
Displaying items 1-50 of 1344 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.