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NECEvent2014_8_3_scaffold_4860_1

Organism: NECEvent2014_8_3_UNK

partial RP 0 / 55 BSCG 0 / 51 ASCG 1 / 38
Location: comp(1..708)

Top 3 Functional Annotations

Value Algorithm Source
LacI family transcriptional regulator n=36 Tax=Bordetella RepID=F4LHG3_BORPC similarity UNIREF
DB: UNIREF100
  • Identity: 43.2
  • Coverage: 236.0
  • Bit_score: 195
  • Evalue 8.30e-47
Periplasmic-binding protein-like domain protein {ECO:0000313|EMBL:KCB44451.1}; TaxID=1331257 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 44.9
  • Coverage: 236.0
  • Bit_score: 206
  • Evalue 5.10e-50
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.6
  • Coverage: 236.0
  • Bit_score: 196
  • Evalue 1.10e-47

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Taxonomy

Bordetella hinzii → Bordetella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
GTGACAATAAAAAAATTGGCTGCAATATTGGGCTTATCTCATACCACGGTATCGCGTGCTTTAAACGATCACCCCGCCATTAGCCAGGCCACCAAAGACAGTGTGCTACAGGCTGCCAGAGATTATGGTTATATTCCCAATAGCGCCGCGCGCGCGCTGCGTAATGCCAGTACCGGCGCATTTGGTCTGGTGATCCCGGATATTCAGAACGATTTCTTTATTACCGTCACCAATGCCATCGCGCATGTCGCCGCCGAGCGCTCCTGGCAGATGATGCTGGGCATTACCAGCGACAAGCCGGAGATGGAACATGCCGCGCTGTTGCGCTTAATGACCGCCCGTGTGGACGGCATTATTTTCGCCCCAACCGCCAACCCTCTTGCAGAAACGCAAGAGCTGATTACCCGTACGAACGCCGTCCAGCTACTGCGCAAACATCGCGGCCTGCAGGCGCCGGTTATCGCTATAGACGATCGCCACGGCATTTCGCTGGCGGTAAAACATCTGCGCGAACTTGGCCACCAGCGTATCGGTTATATTGGCTCCTCCGAAGAGTTGAGCACCGGCTATGAACGTTTACAGGGCTTTCTGCAATGTTTCACCCCGGCAGAACAGACGGCGCTCCAGGCGCTTATTCATGTCGGTCCGCCGCAGGCCGAGTTTGGCGGTGAGGCTTTCAGGCGCGTGATGGCCGCAGAGGCGCCGCCT
PROTEIN sequence
Length: 236
VTIKKLAAILGLSHTTVSRALNDHPAISQATKDSVLQAARDYGYIPNSAARALRNASTGAFGLVIPDIQNDFFITVTNAIAHVAAERSWQMMLGITSDKPEMEHAALLRLMTARVDGIIFAPTANPLAETQELITRTNAVQLLRKHRGLQAPVIAIDDRHGISLAVKHLRELGHQRIGYIGSSEELSTGYERLQGFLQCFTPAEQTALQALIHVGPPQAEFGGEAFRRVMAAEAPP