ggKbase home page

NECEvent2014_8_3_scaffold_2953_3

Organism: NECEvent2014_8_3_Enterobacter-cloacae-rel_55_539

partial RP 35 / 55 MC: 4 BSCG 32 / 51 ASCG 11 / 38 MC: 2
Location: 1977..2492

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor RpoD n=1 Tax=Enterobacter cancerogenus ATCC 35316 RepID=D2ZKJ4_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 95.9
  • Coverage: 123.0
  • Bit_score: 229
  • Evalue 2.90e-57
RNA polymerase sigma factor RpoD similarity KEGG
DB: KEGG
  • Identity: 95.9
  • Coverage: 123.0
  • Bit_score: 229
  • Evalue 8.10e-58
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ent similarity UNIPROT
DB: UniProtKB
  • Identity: 95.9
  • Coverage: 123.0
  • Bit_score: 229
  • Evalue 4.00e-57

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Enterobacter cloacae → Enterobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
GTGCCGAATATCGATCGGGAAGCCCCCGGCAGCCGCACTGAGAGGCAGCGGCAAAAATATAAGTACGCCCTCGCTTTAAAGGTTGATCTGACCTATGCCGAGGTCAATGACCATCTGCCGGAAGATATCGTCGATTCAGATCAAATCGAAGACATCATCCAAATGATCAATGACATGGGCATTCAGGTGATGGAAGAAGCACCGGATGCCGATGATCTGTTGCTGGCTGAAACCTCCAACAACACTGACGAAGATGCGGAAGAAGCTGCTGCACAGGTACTGTCCAGCGTGGAATCTGAAATCGGGCGTACCACTGACCCGGTCCGCATGTACATGCGCGAAATGGGTACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATCGCAAAACGCATCGAAGACGGGATCAACCAGGTTCAGTGCTCTGTTGCGACAGCGCCGATGATGACAACAGCATCGACCCGGAACTGGCGCGCGAGAAGTTTGCCGAGCTGCGTACTCAGTACGAAGTGA
PROTEIN sequence
Length: 172
VPNIDREAPGSRTERQRQKYKYALALKVDLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAPDADDLLLAETSNNTDEDAEEAAAQVLSSVESEIGRTTDPVRMYMREMGTVELLTREGEIDIAKRIEDGINQVQCSVATAPMMTTASTRNWRARSLPSCVLSTK*