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NECEvent2014_8_3_scaffold_18_34

Organism: NECEvent2014_8_3_Clostridium_butyricum_28_57

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: 40033..40605

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium sp. DL-VIII RepID=G7LY96_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 87.9
  • Coverage: 190.0
  • Bit_score: 345
  • Evalue 3.10e-92
  • rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ82849.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 190.0
  • Bit_score: 386
  • Evalue 2.90e-104
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 88.3
  • Coverage: 188.0
  • Bit_score: 344
  • Evalue 1.90e-92

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Taxonomy

Clostridium sp. IBUN22A → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 573
ATGGATTTTAATTATATTGAAGCTTTAGTTACCAAATGTAAAAATAATGATGAAGACGCAAAAGAAAAATTATCTGAAGAATTTAGGCCATTAATTTATAATATTTCTAAAAGAACTTTCATTGATGGATACAATGCCCATGATATTATTCAGGAATGTTACCAATCTCTTTTTAAATCTGTTTCCATGTACAATTTAGAAAAGCATAGATTCGTTGCCTATGCTACCAATGCTATTAAAAATAATATGAATGATTTAATTAAAAGAATTAAAACCAGAAGGTCTACTGAAGGTAATGATGCATTAAGCTTACATGATGATGTTGAAAATGATTTTCCTGAACTTGAAATCTCAACTGAAACTTCATTATGTAAAATGTGTGACTATGAAGATTTAAAATTAGCCCTTAAGAATTTAACTGAAGAGGAAAAAGAACTTATAGATTTTGTATTCTATAGAAATTACACTATAAAGGAATATGCTTATATAAAAAATATGTGCTACTCTACTGCTATTCTAAAAAAGAAAACTATTTTAATGAAAATCCTAAATAATATTTCATTGTATTATTAA
PROTEIN sequence
Length: 191
MDFNYIEALVTKCKNNDEDAKEKLSEEFRPLIYNISKRTFIDGYNAHDIIQECYQSLFKSVSMYNLEKHRFVAYATNAIKNNMNDLIKRIKTRRSTEGNDALSLHDDVENDFPELEISTETSLCKMCDYEDLKLALKNLTEEEKELIDFVFYRNYTIKEYAYIKNMCYSTAILKKKTILMKILNNISLYY*