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NECEvent2014_8_3_scaffold_318_15

Organism: NECEvent2014_8_3_Clostridium_butyricum_28_57

near complete RP 52 / 55 MC: 2 BSCG 50 / 51 MC: 4 ASCG 15 / 38 MC: 1
Location: comp(13199..14377)

Top 3 Functional Annotations

Value Algorithm Source
Site-specific recombinase XerD n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U5G5_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 83.2
  • Coverage: 392.0
  • Bit_score: 689
  • Evalue 2.30e-195
  • rbh
Site-specific recombinase XerD {ECO:0000313|EMBL:EKQ56202.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley similarity UNIPROT
DB: UniProtKB
  • Identity: 83.2
  • Coverage: 392.0
  • Bit_score: 689
  • Evalue 3.30e-195
phage integrase family protein similarity KEGG
DB: KEGG
  • Identity: 79.6
  • Coverage: 392.0
  • Bit_score: 658
  • Evalue 1.60e-186

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Taxonomy

Clostridium sp. Maddingley MBC34-26 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1179
ATGGCTAAAAGATCTAACGGGGAAGGTTCTTCTGGATGGGTAATGAAAAATGGAAAAAAATATTGGTCAATTGTTGTTTCAACAGGCTTTGATCCACTAACTGGAAAACTCAAAAGAAAATTTATTTATGGAAAGACTCAAAAAGAAGCTAAAGAAAAATTAAAACTATATAAAGAAAATTTTACAAAAAATAGTGATAATTCAACTTTAGGTAGTTTCTATTATGACTGGTTATGGAATATTAAACGCCAGGCATTAAAAGCATCTACTTTCGAAAAATGGGAAGGTATTTATAGAAATTATATAAAAGAATATAAAGGATTAGATAATGCTAAATTATGTGATATTGATACAATGTATCTTCAAAAAATAACCAATCAACTTTTAAAAAAACATACTGTATCACAAGTAAAGACACTAAATAGTTGCTTAGGAAATTGTTTCAGATATGCTAAGTCTATCAATAAGATTAAATACAATCCCGTTGAAGGTATTATATATCCTAAAAATCATGATGTTATTGATGAGAAAGAAAATTATATTTCTGAAGAGGAACAAAAAGCTTTTATTTCAGCTTTAGAAGGCGATAAACTTCAAGGAATAATACTTATTGGTTTGATGTGTGGTCTAAGATTAGGTGAAGCTATGGCTTTGCAGGTTAACGATATTGATTTTAATAATATGATTATTAATATAACCAAATCAGTGAAGTATGTTTGGACTGGTGAAAAAACAAAAGAAGGTAAAAAGATTTATGAAAACAGAGTTACAATTCCTAAAACTAAGAAAAGTATAAGAGAAGTTCCTCTTCCTAGTATGTTAAAACCTATAATAAAAAATGTTATAAAAAAGAATATGGAACAGAAATTAAAATATGGTGAATTATATTTAGATAATAACTTAATATTCTGTAAAGATAATGGTGATTACATAGATAATAAGAAACCTAATAGACATTTAAAAAATGTATTAAAAAAAGCTGAGATAAAGTCTGATATACATTATCACAGCTTAAGACATATATTTATAACAAACTGTCTCAGCAAAGATATAAACCCTCGTACTGTTATGGATTGGGTTGGTCACAGTGATATTAAAATGACTATGCTTGTATACGCTGAAATTAATAAAGATAAAAATAAAATGGAATATGAAAAGATTAATTGTATGTTTGATTAA
PROTEIN sequence
Length: 393
MAKRSNGEGSSGWVMKNGKKYWSIVVSTGFDPLTGKLKRKFIYGKTQKEAKEKLKLYKENFTKNSDNSTLGSFYYDWLWNIKRQALKASTFEKWEGIYRNYIKEYKGLDNAKLCDIDTMYLQKITNQLLKKHTVSQVKTLNSCLGNCFRYAKSINKIKYNPVEGIIYPKNHDVIDEKENYISEEEQKAFISALEGDKLQGIILIGLMCGLRLGEAMALQVNDIDFNNMIINITKSVKYVWTGEKTKEGKKIYENRVTIPKTKKSIREVPLPSMLKPIIKNVIKKNMEQKLKYGELYLDNNLIFCKDNGDYIDNKKPNRHLKNVLKKAEIKSDIHYHSLRHIFITNCLSKDINPRTVMDWVGHSDIKMTMLVYAEINKDKNKMEYEKINCMFD*