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NECEvent2014_8_3_scaffold_237_11

Organism: NECEvent2014_8_3_Clostridium_perfringens_28_18

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: comp(8910..9989)

Top 3 Functional Annotations

Value Algorithm Source
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=445334 species="Bacteria; Firmicutes; Clostri similarity UNIPROT
DB: UniProtKB
  • Identity: 99.2
  • Coverage: 359.0
  • Bit_score: 698
  • Evalue 4.90e-198
dinB; DNA polymerase IV (EC:2.7.7.7) similarity KEGG
DB: KEGG
  • Identity: 97.8
  • Coverage: 359.0
  • Bit_score: 685
  • Evalue 1.10e-194
DNA polymerase IV n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BGD5_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.2
  • Coverage: 359.0
  • Bit_score: 698
  • Evalue 3.50e-198
  • rbh

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1080
ATGAAAGAGAATAGAAAGATAATTCATATAGATATGGACGCTTTTTATGCATCCATTGAACAAAGAGATAATCCAAAGTATAAAGGAAAGCCGTTGATTGTTGGCGGGGATCCTAATAGGAGAGGGGTAGTTGCAACTTGCTCTTATGAAGCAAGGAAATACGGAATACATTCAGCTATGCCCTCTTTAATTGCATATAAATTATGTCCGAAAGCTATTTTTATAAGACCTAGAATGGAGGTTTATAAAAAAGTTTCTAGACAGGTTATGAATATATTAAATGAATACTCTAATCTTGTAGAACCCTTGTCCTTAGATGAGGCTTTTGTTGACGTAAGTAAAAGTAAAAGGTGCAAAGGTTCTGCAACCTTAATGGCCCTTGAAATAAAGGAGAGAATATTTAAAGAAGTAGGTCTTACTGCTTCAGCAGGAGTTTCTTTTAATAAATTTTTAGCAAAGATGGCATCAGATTTTAGAAAACCAGATGGTATAACAGTAATAACAGAGGAGAATTCAAAGGATTTTATAAGAAATTTACCTATAGGAAAATTTTTTGGAGTTGGAAGAGTAACTAAAAATAAGCTAAATAATATAGGAGTATTTAAGGGAGAGGATTTACTTAAATTTTCTGAAGAAGAACTTATAGATATTTTTAGTGAAAGAGGCAAGATATTATACGAGTTCGCTAGAGGGATAGATAATAGGCCAGTAAATCCATACAGGATTAGAAAGTCTATAGGTAAAGAAATTACCTTAAGAGAAGACATAGAAGATATAGAAGAAATGATAGAGATTTTAGAGGGAATAGCAGAAAGAGTTAGTGAGAGCTTAGATTTATTGAATAAAAAAGGAAAAACTGTAACCTTAAAGGTGAAATTTAACGACTTTAAACATATAACAAGAAGTATTACTTTAGAACACTTTTTAAAAGAAAAGAAGGAAATAATGGAATGCGTAAAAGATCTTATAAGCATAGTTGATTTTAAAAATAAAAAGGTAAGATTATTAGGAATAACAATATCATCTTTAGAAGAAAATATAATAACAGAAGAAAGAGAGCAGTTAAGCTTTGATGTTTAG
PROTEIN sequence
Length: 360
MKENRKIIHIDMDAFYASIEQRDNPKYKGKPLIVGGDPNRRGVVATCSYEARKYGIHSAMPSLIAYKLCPKAIFIRPRMEVYKKVSRQVMNILNEYSNLVEPLSLDEAFVDVSKSKRCKGSATLMALEIKERIFKEVGLTASAGVSFNKFLAKMASDFRKPDGITVITEENSKDFIRNLPIGKFFGVGRVTKNKLNNIGVFKGEDLLKFSEEELIDIFSERGKILYEFARGIDNRPVNPYRIRKSIGKEITLREDIEDIEEMIEILEGIAERVSESLDLLNKKGKTVTLKVKFNDFKHITRSITLEHFLKEKKEIMECVKDLISIVDFKNKKVRLLGITISSLEENIITEEREQLSFDV*