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NECEvent2014_8_3_scaffold_4662_1

Organism: NECEvent2014_8_3_Clostridium_perfringens_28_18

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 15 / 38 MC: 1
Location: 50..1084

Top 3 Functional Annotations

Value Algorithm Source
Tetracycline efflux protein n=7 Tax=Bacteria RepID=H7D056_CLOPF similarity UNIREF
DB: UNIREF100
  • Identity: 99.7
  • Coverage: 345.0
  • Bit_score: 670
  • Evalue 9.80e-190
  • rbh
TetA {ECO:0000313|EMBL:EDT14619.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 99.7
  • Coverage: 345.0
  • Bit_score: 670
  • Evalue 1.40e-189
major facilitator superfamily similarity KEGG
DB: KEGG
  • Identity: 85.2
  • Coverage: 345.0
  • Bit_score: 574
  • Evalue 2.70e-161

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Taxonomy

Clostridium perfringens → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1035
ATGGTTAATAAACTTTCAGCATATAAAACTTATTTATTATTTTCAGCTATTACAGCAATGTGTTTTTCGTTAGTAGCTACAGTTATGGTAGTGTATCACATTGAAATAGTTCATTTAAATCCACTTCAACTTATACTTGTTGGAACTACTTTGGAATTAGCATGCTTTATATTTGAAATTCCTACAGGTATAGTTGCAGATGTGTATAGTCGTAAACTATCTATTGTTATTGGGGGAGTTTTAACAGGAGTGGGATTTATTTTAGAAGGTTCTATTTCTAGTTTTGTTTTCGTACTTGTAGCACAGATTGTATGGGGATTAGGGTCTACTTTTATCAGTGGCTCGCTTGAAGCTTGGATTGCGGAAGAAGAGAAGAATAAAGATTTAGATGAAATTTATATAAAGGGAGCACAAGCAGGGCAGATAGGAGCATTTATTGGAATAGTACTAAGCACTGTAATAGCTAATTTCTCTGTAAGGCTTCCTATTATAGTTAGTGGAGTTTTATTTATAATTCTTGCATTATTTTTATGGTTATATATGCCAGAAAATAATTTTAAACCATCTGCTCCTGGGGATTTAAATACATTCAAAAAGATGGTATATACATTTAAATCTGGTCTTAAAATTGTAAAAAGTAAATCTATAATTATGATTTTACTTGCAGTAACTTTATTTTATGGATTATCAAGTGAAGGTTATGATAGACTTTCTAATGCACATTTTTTACAAGATACTACACTTCCTAAGCTTGGAAACCTTAGTTCAGTGACTTGGTTTGGAATTTTTGGAATTTTAGGAATGATATTGAGCTTCATAGTAATGCATTTTATGGCAAAGAATCTTAAGAATGAGGATAATAGGAAAAATGGAAAACTATTATTATGTATAAATATACTTTATATATCGTCTATGTTGATATTTGCTCTTACAAAAAACTTTAGTTTAATGTTAATAGCTTATTTGGCAACAAATACCTTTAGAATTATAAATGAACCTATATTCAGTGCGTGGTTAAATGGGCATATAGATGAT
PROTEIN sequence
Length: 345
MVNKLSAYKTYLLFSAITAMCFSLVATVMVVYHIEIVHLNPLQLILVGTTLELACFIFEIPTGIVADVYSRKLSIVIGGVLTGVGFILEGSISSFVFVLVAQIVWGLGSTFISGSLEAWIAEEEKNKDLDEIYIKGAQAGQIGAFIGIVLSTVIANFSVRLPIIVSGVLFIILALFLWLYMPENNFKPSAPGDLNTFKKMVYTFKSGLKIVKSKSIIMILLAVTLFYGLSSEGYDRLSNAHFLQDTTLPKLGNLSSVTWFGIFGILGMILSFIVMHFMAKNLKNEDNRKNGKLLLCINILYISSMLIFALTKNFSLMLIAYLATNTFRIINEPIFSAWLNGHIDD