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NECEvent2014_8_3_scaffold_1207_6

Organism: NECEvent2014_8_3_Clostridium_paraputrificum_30_11

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38 MC: 1
Location: comp(3502..5208)

Top 3 Functional Annotations

Value Algorithm Source
lipid A export ATP-binding/permease protein MsbA (EC:3.6.3.-) similarity KEGG
DB: KEGG
  • Identity: 73.1
  • Coverage: 566.0
  • Bit_score: 838
  • Evalue 9.70e-241
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:EES48133.1}; EC=3.6.3.- {ECO:0000313|EMBL:EES48133.1};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostr similarity UNIPROT
DB: UniProtKB
  • Identity: 73.0
  • Coverage: 566.0
  • Bit_score: 836
  • Evalue 1.80e-239
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Clostridium botulinum (strain Alaska E43 / Type E3) RepID=B2V5F6_CLOBA similarity UNIREF
DB: UNIREF100
  • Identity: 73.1
  • Coverage: 566.0
  • Bit_score: 838
  • Evalue 3.40e-240

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Taxonomy

Clostridium botulinum → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1707
ATGTTTAAAAAGTTTATTAGATTTTATAAGCCATATAAAAAGCTGTTTATATTAGATTTATTGGCAGCATCATTAGCGGCTGCAATAGATTTAGTTTATCCAATGATGACAAGAGAAATAGTGGACAATGCTACAAATCATGGAGAACTAAGAGTAATTGGAGTATTTGCAGTGACTTTAATTATTTTATTTTTAATTAAAGCAGGATGTGGATACTTTATGCAGTATCAAGGACATGTTGTAGGTGTAAGAATGCAAGGAGATATGAGAAGAAAGGTATTTAATCATCTTCAAAAATTACCTAATACCTACTTTGATAACACAAAAACTGGTGACATTATGTCAAGAATTATAAATGACCTACAAGATATTTCAGAGCTTGCACACCATGGTCCTGAAGATTTGTTTATATCAATAGTAATGTTAATTGGTTCATTTATAGTTTTAAGCAGTATAAATTTAACTTTAACCTTAATTATATTTGCCTTTATTCCTATAATAGTTATATTTACAATGTATCAAAGAAAGAGAATGAATAAAGCTTTCTTAAAAACTAGAGTAGAAACTGGTAAGGTAAATGCAGGACTTGAAAATAGCATTAGTGGTATAAGGGTATCAAAAGCCTTTGTAACACATGATTATGAGGAAGAAAAGTTTGAAGAGGGAAATAAGAGCTTTATGAATGCAAGAGAAGGTGCATATAAAATAATGGCTCAATACTTCTCAGGAGCTAACTTTTCATTAGATATTCTTAATTATGTAGTTTTAATTGCCGGGGGAATATATACTTTTAACGGCAGTATTACTGTAGGAGATTTTACAGCGTATCTTTTATATATTAAGGTGTTTATGGACCCAATTAAGAAGCTTATTAACTTTATGGAGCAATTCCAAAGTGGTATGACAGGATTCCAAAGATATGTTGAGATACTTGCAGAGGATAGAGAAAAGGAAAAGAAAGATGCAATTGAATTAAAGGATGTAAAAGGTAAGATAACCTTTAAGGACACATACTTTAGTTATGAAGATAATCAAATTTTAAATGGATTATCAATAGAGATAGAAGCTGGAAAAACTCTAGCTCTTGTTGGTCCTTCAGGTGGAGGTAAGACAACCTTCTGTAATCTTATTCCAAGGTTTTATGATATAGATAAAGGTGATATCCTAATAGATGATAAGAGTATTTATGATGTTACTTTAAGTTCTTTAAGAGAAAATATTGGTATAGTTCAACAAGAAGTATTCTTATTTACTGGTACAATAAAGGATAATATAAGATATGGTAATATGGAAGCTAGTGATGAAGAGGTATATGAAGCTGCAAGAAAAGCTAATATGCATGATTTCATTATGAGTTTAGAAGATGGCTATGATACTTATATTGGAGAAAGAGGAGTTAAGCTTTCAGGGGGACAAAAACAAAGAATATCTATTGCAAGAGTATTCTTGAAAAATCCTCCAATACTTATTTTAGATGAAGCAACATCTGCACTAGATAATACTACAGAGTATTATATTAAGAAGTCTCTTGATGAATTAGCTAAAGGAAGGACAACTATAGTAGTTGCTCATAGGCTTTCTACAATTAGAAATGCAGATGAAATTATAGTTCTTACAGATAAAGGTATCGAAGAGAGAGGAACTCATGAAGAGTTAATGAATATAGAAGGTATATATAAAAAATTAAATAAGTTTGTGCATAATTAA
PROTEIN sequence
Length: 569
MFKKFIRFYKPYKKLFILDLLAASLAAAIDLVYPMMTREIVDNATNHGELRVIGVFAVTLIILFLIKAGCGYFMQYQGHVVGVRMQGDMRRKVFNHLQKLPNTYFDNTKTGDIMSRIINDLQDISELAHHGPEDLFISIVMLIGSFIVLSSINLTLTLIIFAFIPIIVIFTMYQRKRMNKAFLKTRVETGKVNAGLENSISGIRVSKAFVTHDYEEEKFEEGNKSFMNAREGAYKIMAQYFSGANFSLDILNYVVLIAGGIYTFNGSITVGDFTAYLLYIKVFMDPIKKLINFMEQFQSGMTGFQRYVEILAEDREKEKKDAIELKDVKGKITFKDTYFSYEDNQILNGLSIEIEAGKTLALVGPSGGGKTTFCNLIPRFYDIDKGDILIDDKSIYDVTLSSLRENIGIVQQEVFLFTGTIKDNIRYGNMEASDEEVYEAARKANMHDFIMSLEDGYDTYIGERGVKLSGGQKQRISIARVFLKNPPILILDEATSALDNTTEYYIKKSLDELAKGRTTIVVAHRLSTIRNADEIIVLTDKGIEERGTHEELMNIEGIYKKLNKFVHN*